RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 FAM222BQ8WU58 562 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 NINJ1Q92982 152 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 OR2S2Q9NQN1 319 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 RNF150Q9ULK6 438 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 LRBAP50851 2863 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 ODAMA1E959 279 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 HMSDA8MTL9 139 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 DEFB108AA8MXU0 73 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 MPC2O95563 127 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 PSMB6P28072 239 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 IAH1Q2TAA2 248 aaPredicted RBP12.65□□□□□ -0.38
HIF3A-218ENST00000600383 C4orf17Q53FE4 359 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 GGNBP1Q5YKI7 109 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 LIAT1Q6ZQX7 453 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 FOXRED2Q8IWF2 684 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 ZNF561Q8N587 486 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 OR8H1Q8NGG4 311 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 C2orf50Q96LR7 162 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 NMES1Q9C002 83 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 MFFQ9GZY8 342 aa12.65□□□□□ -0.38
HIF3A-218ENST00000600383 NPIPB11E5RHQ5 1161 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 TMPRSS2O15393 492 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 KCNAB3O43448 404 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 PGLYRP1O75594 196 aaPredicted RBP12.64□□□□□ -0.39
HIF3A-218ENST00000600383 MUC1P15941 1255 aaPredicted RBP12.64□□□□□ -0.39
HIF3A-218ENST00000600383 S100GP29377 79 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 GNMTQ14749 295 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 STUMQ69YW2 141 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 OR51H1Q8NH63 302 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 MSI2Q96DH6 328 aaKnown RBP12.64□□□□□ -0.39
HIF3A-218ENST00000600383 LURAP1Q96LR2 239 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 ZNF665Q9H7R5 613 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 ARFGEF3Q5TH69 2177 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 SPINT2O43291 252 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 CLDN14O95500 239 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 PPP1CCP36873 323 aaKnown RBP12.64□□□□□ -0.39
HIF3A-218ENST00000600383 OPCMLQ14982 345 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 EFNB3Q15768 340 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 ZNF672Q499Z4 452 aaPredicted RBP12.64□□□□□ -0.39
HIF3A-218ENST00000600383 TMEM268Q5VZI3 342 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 LGI3Q8N145 548 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 FAM216BQ8N7L0 139 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 OR5D13Q8NGL4 314 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 LHFPL5Q8TAF8 219 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 ARL6Q9H0F7 186 aa12.64□□□□□ -0.39
HIF3A-218ENST00000600383 CFAP46Q8IYW2 2715 aa12.63□□□□□ -0.39
HIF3A-218ENST00000600383 GZMHP20718 246 aa12.63□□□□□ -0.39
HIF3A-218ENST00000600383 OMGP23515 440 aa12.63□□□□□ -0.39
HIF3A-218ENST00000600383 P2RX3P56373 397 aa12.63□□□□□ -0.39
HIF3A-218ENST00000600383 S100A10P60903 97 aa12.63□□□□□ -0.39
HIF3A-218ENST00000600383 ZNF695Q8IW36 515 aa12.63□□□□□ -0.39
HIF3A-218ENST00000600383 C1orf87Q8N0U7 546 aa12.63□□□□□ -0.39
HIF3A-218ENST00000600383 GALNT11Q8NCW6 608 aa12.63□□□□□ -0.39
HIF3A-218ENST00000600383 SDSLQ96GA7 329 aa12.63□□□□□ -0.39
HIF3A-218ENST00000600383 TMEM222Q9H0R3 208 aa12.63□□□□□ -0.39
HIF3A-218ENST00000600383 SEBOXQ9HB31 216 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-218ENST00000600383 TMEM106BQ9NUM4 274 aa12.63□□□□□ -0.39
HIF3A-218ENST00000600383 MBD2Q9UBB5 411 aa12.63□□□□□ -0.39
HIF3A-218ENST00000600383 USP24Q9UPU5 2620 aa12.63□□□□□ -0.39
HIF3A-218ENST00000600383 PPIAL4EA0A075B759 164 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 PPIAL4DF5H284 164 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 TMEM178BH3BS89 294 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 PPIAL4FP0DN26 164 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 ZNF16P17020 682 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-218ENST00000600383 RND3P61587 244 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 TMUB2Q71RG4 321 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 SLC35G3Q8N808 338 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 BVESQ8NE79 360 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 GAFA1Q96PS6 74 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 PPIAL4AQ9Y536 164 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 TRAV38-1A0A0B4J264 116 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 IGLV2-14P01704 120 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 IGHV3-7P01780 117 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 S100A11P31949 105 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 RAB32Q13637 225 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 TEX36Q5VZQ5 186 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 THOC7Q6I9Y2 204 aaKnown RBP12.62□□□□□ -0.39
HIF3A-218ENST00000600383 ZNF788Q6ZQV5 615 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 FGFRL1Q8N441 504 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 ITLN2Q8WWU7 325 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-218ENST00000600383 C18orf12Q96KH6 178 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 HEXA-AS1Q9H8Q6 139 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 RALYQ9UKM9 306 aaKnown RBP12.62□□□□□ -0.39
HIF3A-218ENST00000600383 HCFC1P51610 2035 aa12.62□□□□□ -0.39
HIF3A-218ENST00000600383 RAI1Q7Z5J4 1906 aaPredicted RBP12.61□□□□□ -0.39
HIF3A-218ENST00000600383 C15orf65H3BRN8 121 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 SCGB1D2O95969 90 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 SLC25A4P12235 298 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 NDUFB7P17568 137 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 C4BPBP20851 252 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 F2RP25116 425 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 PAX5Q02548 391 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 SWI5Q1ZZU3 235 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 DCUN1D4Q92564 292 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 RNF126Q9BV68 326 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 OR2D2Q9H210 308 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 GNG12Q9UBI6 72 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 IGHV1-69-2A0A0G2JMI3 117 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 LGALS8O00214 317 aa12.61□□□□□ -0.39
HIF3A-218ENST00000600383 SNAPC5O75971 98 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms