RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 TRDCB7Z8K6 153 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 IGHV3-7P01780 117 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 SCTP09683 121 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 IGHV3-43DP0DP04 118 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 ELK1P19419 428 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 HTR1DP28221 377 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 TMEM69Q5SWH9 247 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 Q6ZS49 121 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 C8orf31Q8N9H6 132 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 OR52L2PQ8NGH6 319 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 NUDCD2Q8WVJ2 157 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 MALSU1Q96EH3 234 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 JMJD8Q96S16 334 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 SLIRPQ9GZT3 109 aaKnown RBP15.68■□□□□ 0.1
UPF1-209ENST00000600310 MEGF9Q9H1U4 602 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 MMP28Q9H239 520 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 DPM3Q9P2X0 92 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 ZNF230Q9UIE0 474 aaPredicted RBP15.68■□□□□ 0.1
UPF1-209ENST00000600310 JMJD1CQ15652 2540 aa15.68■□□□□ 0.1
UPF1-209ENST00000600310 DPPA5A6NC42 116 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 SSX5O60225 188 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 YPEL1O60688 119 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 VENTXO95231 258 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 MNDAP41218 407 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 KIR2DS4P43632 304 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 GNG10P50151 68 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 TAS2R20P59543 309 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 KIR2DS1Q14954 304 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 MORN2Q502X0 79 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 STEAP3Q658P3 488 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 LINC00311Q8N616 119 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 DTX3Q8N9I9 347 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 CREB3L1Q96BA8 519 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 DGCR14Q96DF8 476 aaKnown RBP15.67■□□□□ 0.1
UPF1-209ENST00000600310 YPEL2Q96QA6 119 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 ZNRD1Q9P1U0 126 aa15.67■□□□□ 0.1
UPF1-209ENST00000600310 BUB1B-PAK6H3BSN5 160 aa15.66■□□□□ 0.1
UPF1-209ENST00000600310 CTDSP2O14595 271 aa15.66■□□□□ 0.1
UPF1-209ENST00000600310 FABP7O15540 132 aa15.66■□□□□ 0.1
UPF1-209ENST00000600310 BAMBIQ13145 260 aa15.66■□□□□ 0.1
UPF1-209ENST00000600310 GNMTQ14749 295 aa15.66■□□□□ 0.1
UPF1-209ENST00000600310 LY6G6FQ5SQ64 297 aa15.66■□□□□ 0.1
UPF1-209ENST00000600310 ZDHHC22Q8N966 263 aa15.66■□□□□ 0.1
UPF1-209ENST00000600310 ZNF439Q8NDP4 499 aa15.66■□□□□ 0.1
UPF1-209ENST00000600310 OR10V1Q8NGI7 309 aa15.66■□□□□ 0.1
UPF1-209ENST00000600310 OR4A4PQ8NGN8 299 aa15.66■□□□□ 0.1
UPF1-209ENST00000600310 IL1F10Q8WWZ1 152 aa15.66■□□□□ 0.1
UPF1-209ENST00000600310 MIXL1Q9H2W2 232 aa15.66■□□□□ 0.1
UPF1-209ENST00000600310 ESM1Q9NQ30 184 aa15.66■□□□□ 0.1
UPF1-209ENST00000600310 AMMECR1Q9Y4X0 333 aaPredicted RBP15.66■□□□□ 0.1
UPF1-209ENST00000600310 LEUTXA8MZ59 168 aa15.65■□□□□ 0.1
UPF1-209ENST00000600310 FAM25AB3EWG3 89 aa15.65■□□□□ 0.1
UPF1-209ENST00000600310 FAM25CB3EWG5 89 aa15.65■□□□□ 0.1
UPF1-209ENST00000600310 FAM25GB3EWG6 89 aa15.65■□□□□ 0.1
UPF1-209ENST00000600310 LY6LH3BQJ8 138 aa15.65■□□□□ 0.1
UPF1-209ENST00000600310 RGS11O94810 467 aa15.65■□□□□ 0.1
UPF1-209ENST00000600310 HLA-DQB1P01920 261 aa15.65■□□□□ 0.1
UPF1-209ENST00000600310 PTHLHP12272 177 aa15.65■□□□□ 0.1
UPF1-209ENST00000600310 SSX2Q16385 188 aa15.65■□□□□ 0.1
UPF1-209ENST00000600310 DYNAPQ8N1N2 210 aa15.65■□□□□ 0.1
UPF1-209ENST00000600310 SSMEM1Q8WWF3 244 aa15.65■□□□□ 0.1
UPF1-209ENST00000600310 MAFIPQ8WZ33 124 aa15.65■□□□□ 0.1
UPF1-209ENST00000600310 OCSTAMPQ9BR26 566 aa15.65■□□□□ 0.1
UPF1-209ENST00000600310 ST6GALNAC5Q9BVH7 336 aa15.65■□□□□ 0.1
UPF1-209ENST00000600310 NXF2Q9GZY0 626 aaKnown RBP15.65■□□□□ 0.1
UPF1-209ENST00000600310 IGKV1D-8A0A087WSZ0 117 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 IGKV1-6A0A0C4DH72 117 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 A0A1W2PPE3 182 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 DNAJC9-AS1A6NH13 148 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 CLDN34H7C241 214 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 RGS5O15539 181 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 HOXA3O43365 443 aaPredicted RBP15.64■□□□□ 0.09
UPF1-209ENST00000600310 DIRAS3O95661 229 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 GSTT2P0CG29 244 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 GSTT2BP0CG30 244 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 ZBTB25P24278 435 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 PPP1CCP36873 323 aaKnown RBP15.64■□□□□ 0.09
UPF1-209ENST00000600310 CEACAM3P40198 252 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 IER3P46695 156 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 ZNF134P52741 427 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 HERPUD1Q15011 391 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 SLC9A3R2Q15599 337 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 AANATQ16613 207 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 CT45A1Q5HYN5 189 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 SLC25A48Q6ZT89 311 aaKnown RBP15.64■□□□□ 0.09
UPF1-209ENST00000600310 TMEM86BQ8N661 226 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 CT45A3Q8NHU0 189 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 DCUN1D5Q9BTE7 237 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 CABLES2Q9BTV7 478 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 SLC23A1Q9UHI7 598 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 ADAM30Q9UKF2 790 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 MRPS7Q9Y2R9 242 aaKnown RBP15.64■□□□□ 0.09
UPF1-209ENST00000600310 HILPDAQ9Y5L2 63 aa15.64■□□□□ 0.09
UPF1-209ENST00000600310 VGLL3A8MV65 326 aa15.63■□□□□ 0.09
UPF1-209ENST00000600310 OOSP1A8MZH6 123 aa15.63■□□□□ 0.09
UPF1-209ENST00000600310 SLC31A2O15432 143 aa15.63■□□□□ 0.09
UPF1-209ENST00000600310 TPPPO94811 219 aa15.63■□□□□ 0.09
UPF1-209ENST00000600310 PAX6P26367 422 aa15.63■□□□□ 0.09
UPF1-209ENST00000600310 MADCAM1Q13477 382 aa15.63■□□□□ 0.09
UPF1-209ENST00000600310 TPTE2P1Q5T6R2 138 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms