RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 CST11Q9H112 138 aa9.63□□□□□ -0.87
LIG1-217ENST00000599165 LPAR5Q9H1C0 372 aa9.63□□□□□ -0.87
LIG1-217ENST00000599165 TAF9BQ9HBM6 251 aa9.63□□□□□ -0.87
LIG1-217ENST00000599165 PLSCR3Q9NRY6 295 aa9.63□□□□□ -0.87
LIG1-217ENST00000599165 TRAPPC2LQ9UL33 140 aa9.63□□□□□ -0.87
LIG1-217ENST00000599165 MOB4Q9Y3A3 225 aa9.63□□□□□ -0.87
LIG1-217ENST00000599165 AK6Q9Y3D8 172 aaKnown RBP9.63□□□□□ -0.87
LIG1-217ENST00000599165 LINC01548A6NM66 108 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 G3V4G9 280 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 CCRL2O00421 344 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 SLC17A2O00624 439 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 LDLRAD4O15165 306 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 SOCS1O15524 211 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 BPNT1O95861 308 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 NAPSAO96009 420 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 FAM106CPP0CH98 169 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 HSPA13P48723 471 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 ARHGDIBP52566 201 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 HNF4GQ14541 408 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 P2RY14Q15391 338 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 HMGN3Q15651 99 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 PDLIM3Q53GG5 364 aaPredicted RBP9.62□□□□□ -0.87
LIG1-217ENST00000599165 C6orf183Q5T699 404 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 SAMD5Q5TGI4 173 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 ZNF880Q6PDB4 577 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 PRR18Q8N4B5 295 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 FAM89BQ8N5H3 189 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 OR5AU1Q8NGC0 362 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 OR52L2PQ8NGH6 319 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 OR6M1Q8NGM8 313 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 EAF1Q96JC9 268 aaPredicted RBP9.62□□□□□ -0.87
LIG1-217ENST00000599165 AKR1E2Q96JD6 320 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 TMEM59Q9BXS4 323 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 VCX3BQ9H321 246 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 ACOT13Q9NPJ3 140 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 RAB26Q9ULW5 256 aa9.62□□□□□ -0.87
LIG1-217ENST00000599165 GAPDHP04406 335 aaKnown RBP9.61□□□□□ -0.87
LIG1-217ENST00000599165 TMEM11P17152 192 aa9.61□□□□□ -0.87
LIG1-217ENST00000599165 TMEM50BP56557 158 aa9.61□□□□□ -0.87
LIG1-217ENST00000599165 CLDN12P56749 244 aa9.61□□□□□ -0.87
LIG1-217ENST00000599165 EMX1Q04741 257 aaPredicted RBP9.61□□□□□ -0.87
LIG1-217ENST00000599165 BEAN1Q3B7T3 259 aa9.61□□□□□ -0.87
LIG1-217ENST00000599165 MORN2Q502X0 79 aa9.61□□□□□ -0.87
LIG1-217ENST00000599165 KPRPQ5T749 579 aaPredicted RBP9.61□□□□□ -0.87
LIG1-217ENST00000599165 CD200R1LQ6Q8B3 271 aa9.61□□□□□ -0.87
LIG1-217ENST00000599165 ZNF554Q86TJ5 538 aa9.61□□□□□ -0.87
LIG1-217ENST00000599165 SVOPQ8N4V2 548 aa9.61□□□□□ -0.87
LIG1-217ENST00000599165 Q8N9W7 124 aa9.61□□□□□ -0.87
LIG1-217ENST00000599165 KCNG3Q8TAE7 436 aa9.61□□□□□ -0.87
LIG1-217ENST00000599165 HDHD3Q9BSH5 251 aaPredicted RBP9.61□□□□□ -0.87
LIG1-217ENST00000599165 PARP12Q9H0J9 701 aaKnown RBP9.61□□□□□ -0.87
LIG1-217ENST00000599165 GNG12Q9UBI6 72 aa9.61□□□□□ -0.87
LIG1-217ENST00000599165 M0QZK8 103 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 SPINT2O43291 252 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 FGF16O43320 207 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 PSMA1P25786 263 aaKnown RBP9.6□□□□□ -0.87
LIG1-217ENST00000599165 CALRP27797 417 aaKnown RBP9.6□□□□□ -0.87
LIG1-217ENST00000599165 PPP1CCP36873 323 aaKnown RBP9.6□□□□□ -0.87
LIG1-217ENST00000599165 OR10A3P58181 314 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 HTD2P86397 168 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 TRAM1Q15629 374 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 TMEM30BQ3MIR4 351 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 TRAT1Q6PIZ9 186 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 ZNF367Q7RTV3 350 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 OR2W3Q7Z3T1 314 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 MOB3BQ86TA1 216 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 NR2C2APQ86WQ0 139 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 OR51D1Q8NGF3 324 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 NOL4LQ96MY1 436 aaPredicted RBP9.6□□□□□ -0.87
LIG1-217ENST00000599165 IFI27L2Q9H2X8 130 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 OR2S2Q9NQN1 319 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 NDUFB11Q9NX14 153 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 JPT1Q9UK76 154 aa9.6□□□□□ -0.87
LIG1-217ENST00000599165 TRBV6-6A0A0A6YYG2 114 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 A0A1W2PRX2 142 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 ARL6IP5O75915 188 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 IGHG2P01859 326 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 CD1BP29016 333 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 BLVRBP30043 206 aaPredicted RBP9.59□□□□□ -0.87
LIG1-217ENST00000599165 GABARAPL2P60520 117 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 HES1Q14469 280 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 ARSJQ5FYB0 599 aaPredicted RBP9.59□□□□□ -0.87
LIG1-217ENST00000599165 PLAC9Q5JTB6 97 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 C9orf152Q5JTZ5 239 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 LY6G6FQ5SQ64 297 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 STEAP3Q658P3 488 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 CENPVQ7Z7K6 275 aaPredicted RBP9.59□□□□□ -0.87
LIG1-217ENST00000599165 R3HDM4Q96D70 268 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 RITA1Q96K30 269 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 NEDD4LQ96PU5 975 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 ZNF251Q9BRH9 671 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 AK3Q9UIJ7 227 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 LINC00527Q9UJ94 153 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 KCNK7Q9Y2U2 307 aa9.59□□□□□ -0.87
LIG1-217ENST00000599165 TMEM272A0A1B0GTI8 110 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 H3BUI4 141 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 DENRO43583 198 aaKnown RBP9.58□□□□□ -0.88
LIG1-217ENST00000599165 LANCL1O43813 399 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 YPEL1O60688 119 aa9.58□□□□□ -0.88
LIG1-217ENST00000599165 PEX14O75381 377 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms