RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 Q6ZTK2 550 aa11.12□□□□□ -0.63
UPF1-205ENST00000598209 C8orf31Q8N9H6 132 aa11.12□□□□□ -0.63
UPF1-205ENST00000598209 SETD6Q8TBK2 473 aa11.12□□□□□ -0.63
UPF1-205ENST00000598209 ARHGAP5-AS1Q96IT6 56 aa11.12□□□□□ -0.63
UPF1-205ENST00000598209 OCSTAMPQ9BR26 566 aa11.12□□□□□ -0.63
UPF1-205ENST00000598209 HDHD3Q9BSH5 251 aaPredicted RBP11.12□□□□□ -0.63
UPF1-205ENST00000598209 OR2S2Q9NQN1 319 aa11.12□□□□□ -0.63
UPF1-205ENST00000598209 A0A1W2PPI3 338 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 TIMM23O14925 209 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 SLC31A2O15432 143 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 CLEC2LP0C7M8 214 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 SDC2P34741 201 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 KIR2DS4P43632 304 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 RAB7AP51149 207 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 GNMTQ14749 295 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 MOGAT2Q3SYC2 334 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 PLAC9Q5JTB6 97 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 Q6ZPA2 131 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 MOB1BQ7L9L4 216 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 OR8H3Q8N146 312 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 ZNF439Q8NDP4 499 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 OR52L2PQ8NGH6 319 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 GALMQ96C23 342 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 CENPOQ9BU64 300 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 RIMS4Q9H426 269 aaPredicted RBP11.11□□□□□ -0.63
UPF1-205ENST00000598209 SIGLEC9Q9Y336 463 aa11.11□□□□□ -0.63
UPF1-205ENST00000598209 TRBV6-6A0A0A6YYG2 114 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 TRIM64CA6NLI5 447 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 HSD17B6O14756 317 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 IL3RAP26951 378 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 ZNF134P52741 427 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 KRTAP10-3P60369 221 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 HTD2P86397 168 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 MXD1Q05195 221 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 SRSF4Q08170 494 aaKnown RBP11.1□□□□□ -0.63
UPF1-205ENST00000598209 ZNF816Q0VGE8 651 aaPredicted RBP11.1□□□□□ -0.63
UPF1-205ENST00000598209 TIMM50Q3ZCQ8 353 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 MORN2Q502X0 79 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 FBLN7Q53RD9 439 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 CT45A1Q5HYN5 189 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 SFXN4Q6P4A7 337 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 SLC25A48Q6ZT89 311 aaKnown RBP11.1□□□□□ -0.63
UPF1-205ENST00000598209 C16orf82Q7Z2V1 217 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 DRAM1Q8N682 238 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 DTX3Q8N9I9 347 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 OR10R2Q8NGX6 335 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 OR56B4Q8NH76 319 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 OR2T6Q8NHC8 308 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 CT45A3Q8NHU0 189 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 CAPSLQ8WWF8 208 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 PTX4Q96A99 478 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 RAB3CQ96E17 227 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 YIPF6Q96EC8 236 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 CMSS1Q9BQ75 279 aaKnown RBP11.1□□□□□ -0.63
UPF1-205ENST00000598209 ZNF702PQ9H963 129 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 C12orf4Q9NQ89 552 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 ABRACLQ9P1F3 81 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 DAPK2Q9UIK4 370 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 JPT1Q9UK76 154 aa11.1□□□□□ -0.63
UPF1-205ENST00000598209 METTL21EPA6NDL7 271 aa11.09□□□□□ -0.63
UPF1-205ENST00000598209 FAM90A9PA6NNJ1 464 aa11.09□□□□□ -0.63
UPF1-205ENST00000598209 RAB27BO00194 218 aa11.09□□□□□ -0.63
UPF1-205ENST00000598209 YPEL1O60688 119 aa11.09□□□□□ -0.63
UPF1-205ENST00000598209 GAPDHP04406 335 aaKnown RBP11.09□□□□□ -0.63
UPF1-205ENST00000598209 SNRNP70P08621 437 aaKnown RBP11.09□□□□□ -0.63
UPF1-205ENST00000598209 SNRPBP14678 240 aaKnown RBP11.09□□□□□ -0.63
UPF1-205ENST00000598209 PPP1CCP36873 323 aaKnown RBP11.09□□□□□ -0.63
UPF1-205ENST00000598209 REG1BP48304 166 aa11.09□□□□□ -0.63
UPF1-205ENST00000598209 THNSL2Q86YJ6 484 aa11.09□□□□□ -0.63
UPF1-205ENST00000598209 IL1F10Q8WWZ1 152 aa11.09□□□□□ -0.63
UPF1-205ENST00000598209 CFHR4Q92496 578 aa11.09□□□□□ -0.63
UPF1-205ENST00000598209 ST6GALNAC6Q969X2 333 aa11.09□□□□□ -0.63
UPF1-205ENST00000598209 YPEL2Q96QA6 119 aa11.09□□□□□ -0.63
UPF1-205ENST00000598209 SLC25A33Q9BSK2 321 aa11.09□□□□□ -0.63
UPF1-205ENST00000598209 PRSS22Q9GZN4 317 aa11.09□□□□□ -0.63
UPF1-205ENST00000598209 Q9N2K0 584 aa11.09□□□□□ -0.63
UPF1-205ENST00000598209 KCNK7Q9Y2U2 307 aa11.09□□□□□ -0.63
UPF1-205ENST00000598209 A0A075B6Q4 140 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 IGHV1-3A0A0C4DH29 117 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 AIREO43918 545 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 RGS11O94810 467 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 OR2F2O95006 317 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 CD3GP09693 182 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 FAM106CPP0CH98 169 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 HIST1H1DP16402 221 aaKnown RBP11.08□□□□□ -0.64
UPF1-205ENST00000598209 ZNF137PP52743 207 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 HLA-DRB3P79483 266 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 MRPS15P82914 257 aaKnown RBP11.08□□□□□ -0.64
UPF1-205ENST00000598209 STEAP3Q658P3 488 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 MOB3BQ86TA1 216 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 Q8N2B8 174 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 SGMS2Q8NHU3 365 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 LGALS14Q8TCE9 139 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 AKR1E2Q96JD6 320 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 RBM14Q96PK6 669 aaKnown RBP11.08□□□□□ -0.64
UPF1-205ENST00000598209 CITED1Q99966 193 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 ABHD14AQ9BUJ0 271 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 ATG5Q9H1Y0 275 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 MGAT4AQ9UM21 535 aa11.08□□□□□ -0.64
UPF1-205ENST00000598209 MFNGO00587 321 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms