RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 HSD17B6O14756 317 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 ORC5O43913 435 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 RPLP1P05386 114 aaKnown RBP9.81□□□□□ -0.84
TRIM28-212ENST00000597995 CD37P11049 281 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 MGMTP16455 207 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 GZMHP20718 246 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 MYF6P23409 242 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 GPR12P47775 334 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 LUMP51884 338 aaPredicted RBP9.81□□□□□ -0.84
TRIM28-212ENST00000597995 RAB25P57735 213 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 GABPB1Q06547 395 aaPredicted RBP9.81□□□□□ -0.84
TRIM28-212ENST00000597995 FOXE3Q13461 319 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 GPR50Q13585 617 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 RAB12Q6IQ22 244 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 MOB3BQ86TA1 216 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 Q8N6K4 173 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 OR2T10Q8NGZ9 312 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 EAF1Q96JC9 268 aaPredicted RBP9.81□□□□□ -0.84
TRIM28-212ENST00000597995 UQCC2Q9BRT2 126 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 TMED9Q9BVK6 235 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 MND1Q9BWT6 205 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 SELENOIQ9C0D9 397 aa9.81□□□□□ -0.84
TRIM28-212ENST00000597995 IGHV3-43A0A0B4J1X8 118 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 NCBP2LA6PVI3 153 aaKnown RBP9.8□□□□□ -0.84
TRIM28-212ENST00000597995 C12orf77C9JDV5 145 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 MCRIP1C9JLW8 97 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 AIPO00170 330 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 SLC31A2O15432 143 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 RRP9O43818 475 aaKnown RBP9.8□□□□□ -0.84
TRIM28-212ENST00000597995 CRTAPO75718 401 aaPredicted RBP9.8□□□□□ -0.84
TRIM28-212ENST00000597995 IGHV3-43DP0DP04 118 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 MAPK3P27361 379 aaPredicted RBP9.8□□□□□ -0.84
TRIM28-212ENST00000597995 CHATP28329 748 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 ECI1P42126 302 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 SYT6Q5T7P8 510 aaPredicted RBP9.8□□□□□ -0.84
TRIM28-212ENST00000597995 OR10K2Q6IF99 312 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 TMEM91Q6ZNR0 172 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 LCNL1Q6ZST4 164 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 MS4A15Q8N5U1 240 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 LINC00311Q8N616 119 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 NKAIN3Q8N8D7 197 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 C8orf31Q8N9H6 132 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 Q8N9W7 124 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 OR52M1Q8NGK5 317 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 OR4K15Q8NH41 348 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 NEK7Q8TDX7 302 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 FAM46BQ96A09 425 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 RBMXL1Q96E39 390 aaKnown RBP9.8□□□□□ -0.84
TRIM28-212ENST00000597995 PRR25Q96S07 402 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 GFI1Q99684 422 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 ANKRD60Q9BZ19 345 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 KCNK15Q9H427 330 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 GFOD1Q9NXC2 390 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 SCN3BQ9NY72 215 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 ETAA1Q9NY74 926 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 SCOCQ9UIL1 159 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 PEX16Q9Y5Y5 336 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 STAB2Q8WWQ8 2551 aa9.8□□□□□ -0.84
TRIM28-212ENST00000597995 FAM90A10PA6NDY2 464 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 FAM90A7PA6NKC0 464 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 FAM90A23PA8MXZ1 464 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 SEC14L6B5MCN3 397 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 SDCBPO00560 298 aaPredicted RBP9.79□□□□□ -0.84
TRIM28-212ENST00000597995 IGHG4P01861 327 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 UCHL1P09936 223 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 RCC1P18754 421 aaPredicted RBP9.79□□□□□ -0.84
TRIM28-212ENST00000597995 FUT3P21217 361 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 CRHBPP24387 322 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 CD1BP29016 333 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 REG1BP48304 166 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 ZNF134P52741 427 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 MED22Q15528 200 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 DEFB136Q30KP8 78 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 C1orf100Q5SVJ3 147 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 LIPKQ5VXJ0 399 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 CEACAM19Q7Z692 300 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 ZNF439Q8NDP4 499 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 OR8H1Q8NGG4 311 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 OR1L1Q8NH94 360 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 C4orf3Q8WVX3 66 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 THRSPQ92748 146 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 ST6GALNAC6Q969X2 333 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 SPACA1Q9HBV2 294 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 PLSCR3Q9NRY6 295 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 ZNF580Q9UK33 172 aa9.79□□□□□ -0.84
TRIM28-212ENST00000597995 IGHV3-72A0A0B4J1Y9 119 aa9.78□□□□□ -0.84
TRIM28-212ENST00000597995 UBE2QL1A1L167 161 aa9.78□□□□□ -0.84
TRIM28-212ENST00000597995 ERICH4A6NGS2 130 aa9.78□□□□□ -0.84
TRIM28-212ENST00000597995 HBZP02008 142 aa9.78□□□□□ -0.84
TRIM28-212ENST00000597995 SRMP19623 302 aa9.78□□□□□ -0.84
TRIM28-212ENST00000597995 INSL3P51460 131 aa9.78□□□□□ -0.84
TRIM28-212ENST00000597995 RPS25P62851 125 aaKnown RBP9.78□□□□□ -0.84
TRIM28-212ENST00000597995 QRFPP83859 136 aa9.78□□□□□ -0.84
TRIM28-212ENST00000597995 CFHR3Q02985 330 aa9.78□□□□□ -0.84
TRIM28-212ENST00000597995 UNC119Q13432 240 aa9.78□□□□□ -0.84
TRIM28-212ENST00000597995 TPBGQ13641 420 aa9.78□□□□□ -0.84
TRIM28-212ENST00000597995 FHL3Q13643 280 aa9.78□□□□□ -0.84
TRIM28-212ENST00000597995 Q3ZCU0 254 aa9.78□□□□□ -0.84
TRIM28-212ENST00000597995 MRPL30Q8TCC3 161 aaKnown RBP9.78□□□□□ -0.84
TRIM28-212ENST00000597995 PHYHIPQ92561 330 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms