RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 IL1F10Q8WWZ1 152 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 DEDD2Q8WXF8 326 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 CORO2AQ92828 525 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 ARL11Q969Q4 196 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 GALMQ96C23 342 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 ZNF747Q9BV97 191 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 NECAP2Q9NVZ3 263 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 TAS2R3Q9NYW6 316 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 CALYQ9NYX4 217 aa9.91□□□□□ -0.82
SHKBP1-213ENST00000597325 PPIAL4CA0A0B4J2A2 164 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 KBTBD11-OT1A0A1B0GTJ5 212 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 hCG_1809904A0A1W2PP81 198 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 A0A1W2PPE2 198 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 A0A1W2PR64 198 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 A0A1W2PRV1 198 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 C22orf46C9J442 243 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 HSPA12AO43301 675 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 RAB3DO95716 219 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 HBZP02008 142 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 PMP2P02689 132 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 CD3DP04234 171 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 IFNA6P05013 189 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 CTXN2P0C2S0 81 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 GSTT2P0CG29 244 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 ZNF728P0DKX0 622 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 PPIAL4GP0DN37 164 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 HRH1P35367 487 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 DYRK1AQ13627 763 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 KLF9Q13886 244 aaPredicted RBP9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 ZNF273Q14593 569 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 CDK10Q15131 360 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 TMEM30BQ3MIR4 351 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 STEAP3Q658P3 488 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 TMEM200BQ69YZ2 307 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 STEAP1BQ6NZ63 245 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 TCF23Q7RTU1 214 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 OR5AP2Q8NGF4 316 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 KIRREL1Q96J84 757 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 C7orf50Q9BRJ6 194 aaKnown RBP9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 GINS4Q9BRT9 223 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 LPAR2Q9HBW0 351 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 MCUBQ9NWR8 336 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 EHFQ9NZC4 300 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 ONECUT1Q9UBC0 465 aa9.9□□□□□ -0.82
SHKBP1-213ENST00000597325 IGKV1D-8A0A087WSZ0 117 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 M0QYG6 137 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 SDCBPO00560 298 aaPredicted RBP9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 BET1O15155 118 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 DIRAS3O95661 229 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 AMY2AP04746 511 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 SCTP09683 121 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 CCL3L1P16619 93 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 TSPAN5P62079 268 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 MZT2BQ6NZ67 158 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 SHISA2Q6UWI4 295 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 BTNL3Q6UXE8 466 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 TMEM17Q86X19 198 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 LYSMD2Q8IV50 215 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 OR1L1Q8NH94 360 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 OR10J5Q8NHC4 309 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 UBALD1Q8TB05 177 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 CABLES2Q9BTV7 478 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 IDI2-AS1Q9NZ38 188 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 GNG12Q9UBI6 72 aa9.89□□□□□ -0.83
SHKBP1-213ENST00000597325 IGHV2-70DA0A0C4DH43 119 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 NAP1L6A6NFF2 107 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 B4DSR2 109 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 DISC1C4P0D8 188 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 C15orf65H3BRN8 121 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 TGFAP01135 160 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 RBP4P02753 201 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 CD74P04233 296 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 MSMBP08118 114 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 OR5H8P0DN80 308 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 ZBTB25P24278 435 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 FPR2P25090 351 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 ZFP36P26651 326 aaKnown RBP9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 RFX2P48378 723 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 ASAH1Q13510 395 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 LTC4SQ16873 150 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 C17orf58Q2M2W7 97 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 VAX1Q5SQQ9 334 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 PRAMEF5Q5TYX0 476 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 KIR3DL3Q8N743 410 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 LY6G5BQ8NDX9 201 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 OR4C16Q8NGL9 310 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 RFESDQ8TAC1 157 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 DMRTB1Q96MA1 342 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 HRASLSQ9HDD0 168 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 OR2S2Q9NQN1 319 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 ZNF69Q9UC07 566 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 SLC23A1Q9UHI7 598 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 JPT1Q9UK76 154 aa9.88□□□□□ -0.83
SHKBP1-213ENST00000597325 TRAV20A0A0B4J274 112 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 NPIPB11E5RHQ5 1161 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 M0R1W7 72 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 F2RL2O00254 374 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 LYRM1O43325 122 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 RGS11O94810 467 aa9.87□□□□□ -0.83
SHKBP1-213ENST00000597325 OMGP23515 440 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms