RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 VPS13CQ709C8 3753 aa7.22□□□□□ -1.25
SNRPA-202ENST00000596860 CSMD2Q7Z408 3487 aa7.22□□□□□ -1.25
SNRPA-202ENST00000596860 IGKV1D-8A0A087WSZ0 117 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 IGKV1-6A0A0C4DH72 117 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 MEIS3P1A6NDR6 274 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 FAM157AC9JC47 383 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 PLA2G10O15496 165 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 LYRM1O43325 122 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 SCTP09683 121 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 ZNF735P0CB33 412 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 ZFP36P26651 326 aaKnown RBP7.21□□□□□ -1.26
SNRPA-202ENST00000596860 HLA-DMAP28067 261 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 SSTR5P35346 364 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 RFX2P48378 723 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 RAB7AP51149 207 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 IFITM3Q01628 133 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 PAX8Q06710 450 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 HERPUD1Q15011 391 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 NCR3LG1Q68D85 454 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 LPCAT3Q6P1A2 487 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 H1FOOQ8IZA3 346 aaPredicted RBP7.21□□□□□ -1.26
SNRPA-202ENST00000596860 C11orf42Q8N5U0 333 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 TPRX1Q8N7U7 411 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 DUSP18Q8NEJ0 188 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 OR4C16Q8NGL9 310 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 OR6F1Q8NGZ6 308 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 CCDC107Q8WV48 283 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 ZNF486Q96H40 463 aaPredicted RBP7.21□□□□□ -1.26
SNRPA-202ENST00000596860 KIRREL1Q96J84 757 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 EHFQ9NZC4 300 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 TBC1D24Q9ULP9 559 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 OR2W1Q9Y3N9 320 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 ARHGAP32A7KAX9 2087 aa7.21□□□□□ -1.26
SNRPA-202ENST00000596860 AKAP9Q99996 3911 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 ABCA1O95477 2261 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 PHF1O43189 567 aaPredicted RBP7.2□□□□□ -1.26
SNRPA-202ENST00000596860 HSPA12AO43301 675 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 AMY2AP04746 511 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 IGHV1-8P0DP01 117 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 SLC6A1P30531 599 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 RAG2P55895 527 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 BPIFB3P59826 476 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 TSPAN5P62079 268 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 MADCAM1Q13477 382 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 RBMS2Q15434 407 aaKnown RBP7.2□□□□□ -1.26
SNRPA-202ENST00000596860 TMEM249Q2WGJ8 235 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 MORN2Q502X0 79 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 METTL11BQ5VVY1 283 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 FAM71F2Q6NXP2 309 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 GLCCI1Q86VQ1 547 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 FGFRL1Q8N441 504 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 ZDHHC22Q8N966 263 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.2□□□□□ -1.26
SNRPA-202ENST00000596860 ZBTB34Q8NCN2 500 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 BEND2Q8NDZ0 799 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 OR11H6Q8NGC7 330 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 OR1L1Q8NH94 360 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 TERB2Q8NHR7 220 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 CREB3L1Q96BA8 519 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 MOB3AQ96BX8 217 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 CYYR1Q96J86 154 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 GINS4Q9BRT9 223 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 SIRPDQ9H106 197 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 NARFLQ9H6Q4 476 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 HEXA-AS1Q9H8Q6 139 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 OR2S2Q9NQN1 319 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 ITPR3Q14573 2671 aa7.2□□□□□ -1.26
SNRPA-202ENST00000596860 RNF223E7ERA6 249 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 SDCBPO00560 298 aaPredicted RBP7.19□□□□□ -1.26
SNRPA-202ENST00000596860 PPYP01298 95 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 PMP2P02689 132 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 MMP9P14780 707 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 FOSL1P15407 271 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 CCL3L1P16619 93 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 FCGR2CP31995 323 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 CEACAM6P40199 344 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 ZNF137PP52743 207 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 UBE2MP61081 183 aaKnown RBP7.19□□□□□ -1.26
SNRPA-202ENST00000596860 RGS21Q2M5E4 152 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 IGSF11Q5DX21 431 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 RNASE12Q5GAN4 147 aaKnown RBP7.19□□□□□ -1.26
SNRPA-202ENST00000596860 CYB5R2Q6BCY4 276 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 ZNF782Q6ZMW2 699 aaPredicted RBP7.19□□□□□ -1.26
SNRPA-202ENST00000596860 SLC25A48Q6ZT89 311 aaKnown RBP7.19□□□□□ -1.26
SNRPA-202ENST00000596860 Q8N7P7 452 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 ZNF439Q8NDP4 499 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 WFDC11Q8NEX6 87 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 OR13D1Q8NGV5 346 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 OR9G1Q8NH87 305 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 ZFAND1Q8TCF1 268 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 MAFIPQ8WZ33 124 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 TMEM186Q96B77 213 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 AKR1E2Q96JD6 320 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 SLC6A7Q99884 636 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 TINAGL1Q9GZM7 467 aaPredicted RBP7.19□□□□□ -1.26
SNRPA-202ENST00000596860 C11orf54Q9H0W9 315 aaPredicted RBP7.19□□□□□ -1.26
SNRPA-202ENST00000596860 TMEM133Q9H2Q1 129 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 DPAGT1Q9H3H5 408 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 ING3Q9NXR8 418 aa7.19□□□□□ -1.26
SNRPA-202ENST00000596860 RDH8Q9NYR8 311 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms