RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 PSMB11A5LHX3 300 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 TMEM14DPA8MWL7 114 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 H0YHG0 523 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 SLC22A1O15245 554 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 SPINT2O43291 252 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 CA11O75493 328 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 IGHG2P01859 326 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 GLAP06280 429 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 UBBP0CG47 229 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 PF4V1P10720 104 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 RPS27AP62979 156 aaKnown RBP10.31□□□□□ -0.76
LIG1-212ENST00000596549 TRAT1Q6PIZ9 186 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 ETV3LQ6ZN32 361 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 C6orf201Q7Z4U5 140 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 CEACAM19Q7Z692 300 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 MOB3BQ86TA1 216 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 ZNF329Q86UD4 541 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 ODF3L1Q8IXM7 274 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 Q8N9W7 124 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 UFD1Q92890 307 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 TMEM203Q969S6 136 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 TM2D1Q9BX74 207 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 TMEM59Q9BXS4 323 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 GNG12Q9UBI6 72 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 LINC00527Q9UJ94 153 aa10.31□□□□□ -0.76
LIG1-212ENST00000596549 LINC01548A6NM66 108 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 RGS10O43665 173 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 SRMP19623 302 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 CRHBPP24387 322 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 IL3RAP26951 378 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 HTR2CP28335 458 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 HMGN3Q15651 99 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 MORN2Q502X0 79 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 KHDC1LQ5JSQ8 128 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 GLT8D1Q68CQ7 371 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 IZUMO2Q6UXV1 221 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 C18orf65Q6ZTR6 163 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 TGIF2LXQ8IUE1 241 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 SVOPQ8N4V2 548 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 OR52L2PQ8NGH6 319 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 PLSCR3Q9NRY6 295 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 JPT1Q9UK76 154 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 TPRKBQ9Y3C4 175 aa10.3□□□□□ -0.76
LIG1-212ENST00000596549 SERPINE3A8MV23 424 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 TXNL1O43396 289 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 HSMCR30P0CW71 290 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 IGLL1P15814 213 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 CD1BP29016 333 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 PPP1CCP36873 323 aaKnown RBP10.29□□□□□ -0.76
LIG1-212ENST00000596549 MAP2K4P45985 399 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 MLLT11Q13015 90 aaPredicted RBP10.29□□□□□ -0.76
LIG1-212ENST00000596549 LSAMPQ13449 338 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 TPBGQ13641 420 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 SLC35E3Q7Z769 313 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 ZNF554Q86TJ5 538 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 STPG2Q8N412 459 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 FAM71E2Q8N5Q1 922 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 WFDC9Q8NEX5 89 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 OR6M1Q8NGM8 313 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 OR2T10Q8NGZ9 312 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 HSPB9Q9BQS6 159 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 FAAP24Q9BTP7 215 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 ABHD14AQ9BUJ0 271 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 LPAR5Q9H1C0 372 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 ABCG5Q9H222 651 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 RAB9BQ9NP90 201 aa10.29□□□□□ -0.76
LIG1-212ENST00000596549 LIN7CQ9NUP9 197 aaKnown RBP10.29□□□□□ -0.76
LIG1-212ENST00000596549 AURKAIP1Q9NWT8 199 aaPredicted RBP10.29□□□□□ -0.76
LIG1-212ENST00000596549 ERICH4A6NGS2 130 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 FOXI3A8MTJ6 420 aaPredicted RBP10.28□□□□□ -0.76
LIG1-212ENST00000596549 LANCL1O43813 399 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 BPNT1O95861 308 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 NAPSAO96009 420 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 MOSP00540 346 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 PF4P02776 101 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 CPEP16870 476 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 CD33P20138 364 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 GPR12P47775 334 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 RPL23AP62750 156 aaKnown RBP10.28□□□□□ -0.76
LIG1-212ENST00000596549 HTD2P86397 168 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 FABP5Q01469 135 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 TBCEQ15813 527 aaPredicted RBP10.28□□□□□ -0.76
LIG1-212ENST00000596549 FOXB2Q5VYV0 432 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 ZNF880Q6PDB4 577 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 PRSS48Q7RTY5 328 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 LINC00482Q8N8I6 264 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 KCNG3Q8TAE7 436 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 CHPT1Q8WUD6 406 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 CCDC90BQ9GZT6 254 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 IFI27L2Q9H2X8 130 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 ISYNA1Q9NPH2 558 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 OR2S2Q9NQN1 319 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 DNAH3Q8TD57 4116 aa10.28□□□□□ -0.76
LIG1-212ENST00000596549 SAA2-SAA4A0A096LPE2 208 aa10.27□□□□□ -0.77
LIG1-212ENST00000596549 NCBP2LA6PVI3 153 aaKnown RBP10.27□□□□□ -0.77
LIG1-212ENST00000596549 SLC17A2O00624 439 aa10.27□□□□□ -0.77
LIG1-212ENST00000596549 SOCS1O15524 211 aa10.27□□□□□ -0.77
LIG1-212ENST00000596549 YPEL1O60688 119 aa10.27□□□□□ -0.77
LIG1-212ENST00000596549 SAA2P0DJI9 122 aaPredicted RBP10.27□□□□□ -0.77
LIG1-212ENST00000596549 F2RL1P55085 397 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms