RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 IL1F10Q8WWZ1 152 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 LEAP2Q969E1 77 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 CREB3L1Q96BA8 519 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 MALSU1Q96EH3 234 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 AJUBAQ96IF1 538 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 ZNF48Q96MX3 618 aaPredicted RBP6.79□□□□□ -1.32
VRK3-211ENST00000596445 OCSTAMPQ9BR26 566 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 DCUN1D5Q9BTE7 237 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 C6orf62Q9GZU0 229 aaPredicted RBP6.79□□□□□ -1.32
VRK3-211ENST00000596445 MIXL1Q9H2W2 232 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 PRDM13Q9H4Q3 707 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 OCEL1Q9H607 264 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 OR2S2Q9NQN1 319 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 GNG12Q9UBI6 72 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 ZNF230Q9UIE0 474 aaPredicted RBP6.79□□□□□ -1.32
VRK3-211ENST00000596445 JPT1Q9UK76 154 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 PSG11Q9UQ72 335 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 TBL2Q9Y4P3 447 aaKnown RBP6.79□□□□□ -1.32
VRK3-211ENST00000596445 MINOS1-NBL1R4GNA1 71 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 A3GALT2U3KPV4 340 aa6.79□□□□□ -1.32
VRK3-211ENST00000596445 A0A0A6YYJ9 748 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 IGHV3-43A0A0B4J1X8 118 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 A6NHS1 94 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 LEUTXA8MZ59 168 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 FABP7O15540 132 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 TCF21O43680 179 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 YPEL1O60688 119 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 RGS11O94810 467 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 TPPPO94811 219 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 DIRAS3O95661 229 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 IGHV3-7P01780 117 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 HLA-DQB1P01920 261 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 SCTP09683 121 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 IGHV3-43DP0DP04 118 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 PTHLHP12272 177 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 HTR1DP28221 377 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 PRSS3P35030 304 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 PPP1CCP36873 323 aaKnown RBP6.78□□□□□ -1.32
VRK3-211ENST00000596445 CBX5P45973 191 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 GNG10P50151 68 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 HLA-DRB5Q30154 266 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 MORN2Q502X0 79 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 LY6G6FQ5SQ64 297 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 LDLRAD2Q5SZI1 272 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 FAM53AQ6NSI3 398 aaPredicted RBP6.78□□□□□ -1.32
VRK3-211ENST00000596445 CNIH2Q6PI25 160 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 RBMS3Q6XE24 437 aaKnown RBP6.78□□□□□ -1.32
VRK3-211ENST00000596445 SLC25A48Q6ZT89 311 aaKnown RBP6.78□□□□□ -1.32
VRK3-211ENST00000596445 LHFPL4Q7Z7J7 247 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 LINC00311Q8N616 119 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 OR52L2PQ8NGH6 319 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 OR10V1Q8NGI7 309 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 OR4P4Q8NGL7 312 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 MAFIPQ8WZ33 124 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 ZDHHC16Q969W1 377 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 YPEL2Q96QA6 119 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 ST6GALNAC5Q9BVH7 336 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 MEGF9Q9H1U4 602 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 MMP28Q9H239 520 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 MMP27Q9H306 513 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 DPM3Q9P2X0 92 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 EXTL2Q9UBQ6 330 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 SLC23A1Q9UHI7 598 aa6.78□□□□□ -1.32
VRK3-211ENST00000596445 MRPS7Q9Y2R9 242 aaKnown RBP6.78□□□□□ -1.32
VRK3-211ENST00000596445 AMMECR1Q9Y4X0 333 aaPredicted RBP6.78□□□□□ -1.32
VRK3-211ENST00000596445 IGKV1-6A0A0C4DH72 117 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 MDFIC2A0A1B0GVS7 189 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 LY6LH3BQJ8 138 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 BUB1B-PAK6H3BSN5 160 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 HSPA12AO43301 675 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 LPLP06858 475 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 GSTT2P0CG29 244 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 GSTT2BP0CG30 244 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 ZBTB25P24278 435 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 CEACAM3P40198 252 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 CEACAM6P40199 344 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 ZNF134P52741 427 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 RIPPLY3P57055 190 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 HILS1P60008 231 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 GNMTQ14749 295 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 HERPUD1Q15011 391 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 AANATQ16613 207 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 IGSF11Q5DX21 431 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 CT45A1Q5HYN5 189 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 Q6YL49 198 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 HOGA1Q86XE5 327 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 LDLRAD3Q86YD5 345 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 SNX29P2Q8IUI4 249 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 GVQW1Q8N7I0 195 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 ZNF439Q8NDP4 499 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 OR10X1Q8NGY0 326 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 CT45A3Q8NHU0 189 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 C15orf40Q8WUR7 153 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 C17orf50Q8WW18 174 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 DIRAS2Q96HU8 199 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 JMJD8Q96S16 334 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 CABLES2Q9BTV7 478 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 SCPEP1Q9HB40 452 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 BATF3Q9NR55 127 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 OR1A1Q9P1Q5 309 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms