RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 GLRA1P23415 457 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 APLNRP35414 380 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 GPM6AP51674 278 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 RND2P52198 227 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 TAS2R46P59540 309 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 ARL6IP1Q15041 203 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 IGFL2Q6UWQ7 119 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 MDP1Q86V88 176 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 SGPP2Q8IWX5 399 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 BCL2L2Q92843 193 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 SNHG12Q9BXW3 62 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 KIAA1456Q9P272 454 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 AK3Q9UIJ7 227 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 LSM5Q9Y4Y9 91 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 ARHGAP21Q5T5U3 1957 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 C1QL1O75973 258 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 HSPB1P04792 205 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 CEACAM1P13688 526 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 NPBWR2P48146 333 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 IGF2-ASQ6U949 168 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 ASCL4Q6XD76 172 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 FAM213BQ8TBF2 198 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 TECTBQ96PL2 329 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 C14orf166Q9Y224 244 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 GOLT1BQ9Y3E0 138 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 FAM221AA4D161 298 aa14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 IGHG3P01860 377 aa14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 ZNF25P17030 456 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 OPRM1P35372 400 aa14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 WNT5AP41221 380 aa14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 ECI1P42126 302 aa14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 DLL3Q9NYJ7 618 aa14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 DCHS1Q96JQ0 3298 aa14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 SVILO95425 2214 aa14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 MSTNO14793 375 aa14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 DLEU1O43261 78 aa14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 SPATA46Q5T0L3 261 aa14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 MRPL52Q86TS9 123 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 CNEP1R1Q8N9A8 125 aa14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 OR10J5Q8NHC4 309 aa14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 FGF23Q9GZV9 251 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-205ENST00000594973 TNRC6AQ8NDV7 1962 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-205ENST00000594973 ZNF891A8MT65 544 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-205ENST00000594973 H0YL77 283 aa14.56□□□□□ -0.08
SHKBP1-205ENST00000594973 LYZL6O75951 148 aa14.56□□□□□ -0.08
SHKBP1-205ENST00000594973 AMBPP02760 352 aa14.56□□□□□ -0.08
SHKBP1-205ENST00000594973 TDGF1P3P51864 188 aa14.56□□□□□ -0.08
SHKBP1-205ENST00000594973 RND3P61587 244 aa14.56□□□□□ -0.08
SHKBP1-205ENST00000594973 COA6Q5JTJ3 125 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-205ENST00000594973 RTL6Q6ICC9 239 aa14.56□□□□□ -0.08
SHKBP1-205ENST00000594973 BSCL2Q96G97 398 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-205ENST00000594973 SH3BGRL3Q9H299 93 aa14.56□□□□□ -0.08
SHKBP1-205ENST00000594973 CLCF1Q9UBD9 225 aa14.56□□□□□ -0.08
SHKBP1-205ENST00000594973 MAP1BP46821 2468 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 TRBV24-1A0A075B6N3 115 aa14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 M0QZK8 103 aa14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 SS18L1O75177 396 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 GGCTO75223 188 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 PTGER4P35408 488 aa14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 ZDHHC23Q8IYP9 409 aa14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 NANOS1Q8WY41 292 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 CDH20Q9HBT6 801 aa14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 GP6Q9HCN6 339 aa14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 LILRA1O75019 489 aa14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 OR7C1O76099 320 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 PGA5P0DJD9 388 aa14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 HAGHQ16775 308 aa14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 ZNF506Q5JVG8 444 aa14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 SPSB3Q6PJ21 355 aa14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 MYPOPQ86VE0 399 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 OR10G4Q8NGN3 311 aa14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 HSF4Q9ULV5 492 aa14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 DMXL2Q8TDJ6 3036 aa14.55□□□□□ -0.08
SHKBP1-205ENST00000594973 CD300LBA8K4G0 201 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 ZNF732B4DXR9 585 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 TM4SF5O14894 197 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 CA11O75493 328 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 ZNF205O95201 554 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 TK1P04183 234 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 CELA3BP08861 270 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 IGHV1-2P23083 117 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 NBL1P41271 181 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 CEACAM21Q3KPI0 293 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 TMEM182Q6ZP80 229 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 FAM214BQ7L5A3 538 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 SNX22Q96L94 193 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 IL36GQ9NZH8 169 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 CLDN34H7C241 214 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 BCL3P20749 454 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 RBM11P57052 281 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 HLA-DRB3P79483 266 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 SP5Q6BEB4 398 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 ANXA10Q9UJ72 324 aa14.54□□□□□ -0.08
SHKBP1-205ENST00000594973 ATMQ13315 3056 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 SCAF4O95104 1147 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 KNG1P01042 644 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 MBPP02686 304 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 ERVFC1-1P60608 527 aa14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 PNRC1Q12796 327 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-205ENST00000594973 IL13RA2Q14627 380 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms