RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 A0A0B4J2A0 478 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 TEX13DA0A0J9YY54 714 aaPredicted RBP12.59□□□□□ -0.39
VRK3-207ENST00000594092 CRYM-AS1A6NIL9 109 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 C15orf65H3BRN8 121 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 IFNA2P01563 188 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 NDUFB7P17568 137 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 DNASE1P24855 282 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 SSTR5P35346 364 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 H2BFSP57053 126 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 AVPI1Q5T686 147 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 KCTD9Q7L273 389 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 H1FOOQ8IZA3 346 aaPredicted RBP12.59□□□□□ -0.39
VRK3-207ENST00000594092 ZNF565Q8N9K5 539 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 CCDC71LQ8N9Z2 235 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 OR5M8Q8NGP6 311 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 ARL11Q969Q4 196 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 C14orf79Q96F83 325 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 OR6C3Q9NZP0 311 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 PIPOXQ9P0Z9 390 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 SHPKQ9UHJ6 478 aa12.59□□□□□ -0.39
VRK3-207ENST00000594092 RPS2P15880 293 aaKnown RBP12.58□□□□□ -0.4
VRK3-207ENST00000594092 GZMHP20718 246 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 EFNA4P52798 201 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 GALMQ96C23 342 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 FAM210AQ96ND0 272 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 CHODLQ9H9P2 273 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 SLC2A9Q9NRM0 540 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 OPN4Q9UHM6 478 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 DSCAML1Q8TD84 2053 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 DBX1A6NMT0 343 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 HSPA12AO43301 675 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 PPIHO43447 177 aaKnown RBP12.58□□□□□ -0.4
VRK3-207ENST00000594092 NDUFB3O43676 98 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 HEXAP06865 529 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 HLA-GP17693 338 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 IL2RGP31785 369 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 PHLDA2Q53GA4 152 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 LRRC10Q5BKY1 277 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 LY6G6FQ5SQ64 297 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 DCAF12L2Q5VW00 463 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 SECTM1Q8WVN6 248 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 RTN4IP1Q8WWV3 396 aaPredicted RBP12.58□□□□□ -0.4
VRK3-207ENST00000594092 RAB1CQ92928 201 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 TIMD4Q96H15 378 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 NAA60Q9H7X0 242 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 KCNIP3Q9Y2W7 256 aa12.58□□□□□ -0.4
VRK3-207ENST00000594092 USP9YO00507 2555 aaPredicted RBP12.57□□□□□ -0.4
VRK3-207ENST00000594092 IGKV1D-13A0A0B4J2D9 117 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 DVL1O14640 695 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 SPINT2O43291 252 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 CGB3P0DN86 165 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 CGB7P0DN87 165 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 IGKV1-13P0DP09 117 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 TMEM33P57088 247 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 TCF23Q7RTU1 214 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 FAM185AQ8N0U4 392 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 ZNF295-AS1Q8N0V1 137 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 RFESDQ8TAC1 157 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 CCL19Q99731 98 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 PDCD10Q9BUL8 212 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 SLC5A7Q9GZV3 580 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 OR2W1Q9Y3N9 320 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 TENM4Q6N022 2769 aa12.57□□□□□ -0.4
VRK3-207ENST00000594092 TRGV10A0A0A0MS01 117 aa12.56□□□□□ -0.4
VRK3-207ENST00000594092 GPR31O00270 319 aa12.56□□□□□ -0.4
VRK3-207ENST00000594092 CCSO14618 274 aa12.56□□□□□ -0.4
VRK3-207ENST00000594092 RGS11O94810 467 aa12.56□□□□□ -0.4
VRK3-207ENST00000594092 GNRHRP30968 328 aa12.56□□□□□ -0.4
VRK3-207ENST00000594092 CEACAM6P40199 344 aa12.56□□□□□ -0.4
VRK3-207ENST00000594092 ANKRD55Q3KP44 614 aa12.56□□□□□ -0.4
VRK3-207ENST00000594092 LDLRAD3Q86YD5 345 aa12.56□□□□□ -0.4
VRK3-207ENST00000594092 OR52L2PQ8NGH6 319 aa12.56□□□□□ -0.4
VRK3-207ENST00000594092 CORO2AQ92828 525 aa12.56□□□□□ -0.4
VRK3-207ENST00000594092 RDH8Q9NYR8 311 aa12.56□□□□□ -0.4
VRK3-207ENST00000594092 FAM25EA8MYX2 175 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 COL8A1P27658 744 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 RPL31P62899 125 aaKnown RBP12.55□□□□□ -0.4
VRK3-207ENST00000594092 HTD2P86397 168 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 GNMTQ14749 295 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 C17orf58Q2M2W7 97 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 TMEM155Q4W5P6 130 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 CRYBG3Q68DQ2 2970 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 FAM53AQ6NSI3 398 aaPredicted RBP12.55□□□□□ -0.4
VRK3-207ENST00000594092 GALNT14Q96FL9 552 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 TOLLIPQ9H0E2 274 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 PARP12Q9H0J9 701 aaKnown RBP12.55□□□□□ -0.4
VRK3-207ENST00000594092 RAB18Q9NP72 206 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 C19orf12Q9NSK7 152 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 CALYQ9NYX4 217 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 PRR13Q9NZ81 148 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 hADV38S2A0JD32 116 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 G3V3Q6 166 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 S100GP29377 79 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 RND3P61587 244 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 MEF2CQ06413 473 aaPredicted RBP12.55□□□□□ -0.4
VRK3-207ENST00000594092 GSG1LQ6UXU4 331 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 ZNF841Q6ZN19 808 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 CMTM1Q8IZ96 169 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 OR11H4Q8NGC9 324 aa12.55□□□□□ -0.4
VRK3-207ENST00000594092 OR10V1Q8NGI7 309 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms