RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 OR1L1Q8NH94 360 aa18.69■□□□□ 0.58
LSM4-202ENST00000593564 MUL1Q969V5 352 aa18.69■□□□□ 0.58
LSM4-202ENST00000593564 RBMXL1Q96E39 390 aaKnown RBP18.69■□□□□ 0.58
LSM4-202ENST00000593564 KCTD7Q96MP8 289 aa18.69■□□□□ 0.58
LSM4-202ENST00000593564 PRR25Q96S07 402 aa18.69■□□□□ 0.58
LSM4-202ENST00000593564 SMPD3Q9NY59 655 aaPredicted RBP18.69■□□□□ 0.58
LSM4-202ENST00000593564 CLEC2DQ9UHP7 191 aa18.69■□□□□ 0.58
LSM4-202ENST00000593564 U3KQK5 164 aa18.69■□□□□ 0.58
LSM4-202ENST00000593564 LANCL1O43813 399 aa18.68■□□□□ 0.58
LSM4-202ENST00000593564 LSAMPQ13449 338 aa18.68■□□□□ 0.58
LSM4-202ENST00000593564 PRR18Q8N4B5 295 aa18.68■□□□□ 0.58
LSM4-202ENST00000593564 JAGN1Q8N5M9 183 aa18.68■□□□□ 0.58
LSM4-202ENST00000593564 MYOZ3Q8TDC0 251 aa18.68■□□□□ 0.58
LSM4-202ENST00000593564 PGLYRP3Q96LB9 341 aa18.68■□□□□ 0.58
LSM4-202ENST00000593564 CHCHD6Q9BRQ6 235 aa18.68■□□□□ 0.58
LSM4-202ENST00000593564 ZNF107Q9UII5 783 aaPredicted RBP18.68■□□□□ 0.58
LSM4-202ENST00000593564 SCOCQ9UIL1 159 aa18.68■□□□□ 0.58
LSM4-202ENST00000593564 PEX16Q9Y5Y5 336 aa18.68■□□□□ 0.58
LSM4-202ENST00000593564 STAB2Q8WWQ8 2551 aa18.67■□□□□ 0.58
LSM4-202ENST00000593564 TRBV5-7A0A0A0MS05 114 aa18.67■□□□□ 0.58
LSM4-202ENST00000593564 FAM90A10PA6NDY2 464 aa18.67■□□□□ 0.58
LSM4-202ENST00000593564 FAM90A7PA6NKC0 464 aa18.67■□□□□ 0.58
LSM4-202ENST00000593564 FAM90A23PA8MXZ1 464 aa18.67■□□□□ 0.58
LSM4-202ENST00000593564 SC5DO75845 299 aa18.67■□□□□ 0.58
LSM4-202ENST00000593564 ECI1P42126 302 aa18.67■□□□□ 0.58
LSM4-202ENST00000593564 CDH26Q8IXH8 852 aa18.67■□□□□ 0.58
LSM4-202ENST00000593564 GLAP06280 429 aa18.66■□□□□ 0.58
LSM4-202ENST00000593564 RCC1P18754 421 aaPredicted RBP18.66■□□□□ 0.58
LSM4-202ENST00000593564 MMDQ15546 238 aa18.66■□□□□ 0.58
LSM4-202ENST00000593564 AWAT2Q6E213 333 aa18.66■□□□□ 0.58
LSM4-202ENST00000593564 ZFP41Q8N8Y5 198 aa18.66■□□□□ 0.58
LSM4-202ENST00000593564 ZNF485Q8NCK3 441 aa18.66■□□□□ 0.58
LSM4-202ENST00000593564 OR14A2Q96R54 314 aa18.66■□□□□ 0.58
LSM4-202ENST00000593564 OR2S2Q9NQN1 319 aa18.66■□□□□ 0.58
LSM4-202ENST00000593564 CHCHD3Q9NX63 227 aaKnown RBP18.66■□□□□ 0.58
LSM4-202ENST00000593564 SLC2A2P11168 524 aaPredicted RBP18.65■□□□□ 0.58
LSM4-202ENST00000593564 ADARB1P78563 741 aaKnown RBP18.65■□□□□ 0.58
LSM4-202ENST00000593564 MED21Q13503 144 aa18.65■□□□□ 0.58
LSM4-202ENST00000593564 MORN2Q502X0 79 aa18.65■□□□□ 0.58
LSM4-202ENST00000593564 NKAPLQ5M9Q1 402 aa18.65■□□□□ 0.58
LSM4-202ENST00000593564 ZNF554Q86TJ5 538 aa18.65■□□□□ 0.58
LSM4-202ENST00000593564 OR11H1Q8NG94 326 aa18.65■□□□□ 0.58
LSM4-202ENST00000593564 TMEM80Q96HE8 168 aa18.65■□□□□ 0.58
LSM4-202ENST00000593564 SELENOIQ9C0D9 397 aa18.65■□□□□ 0.58
LSM4-202ENST00000593564 BANF2Q9H503 90 aa18.65■□□□□ 0.58
LSM4-202ENST00000593564 TAF9BQ9HBM6 251 aa18.65■□□□□ 0.58
LSM4-202ENST00000593564 MBNL3Q9NUK0 354 aaKnown RBP18.65■□□□□ 0.58
LSM4-202ENST00000593564 A0A1W2PPK0 400 aa18.64■□□□□ 0.57
LSM4-202ENST00000593564 MGMTP16455 207 aa18.64■□□□□ 0.57
LSM4-202ENST00000593564 FUT3P21217 361 aa18.64■□□□□ 0.57
LSM4-202ENST00000593564 MYF6P23409 242 aa18.64■□□□□ 0.57
LSM4-202ENST00000593564 PPIFP30405 207 aaKnown RBP18.64■□□□□ 0.57
LSM4-202ENST00000593564 ZNF260Q3ZCT1 412 aa18.64■□□□□ 0.57
LSM4-202ENST00000593564 LYPD6Q86Y78 171 aa18.64■□□□□ 0.57
LSM4-202ENST00000593564 UBE2E2Q96LR5 201 aa18.64■□□□□ 0.57
LSM4-202ENST00000593564 Q96M66 194 aa18.64■□□□□ 0.57
LSM4-202ENST00000593564 ABHD14AQ9BUJ0 271 aa18.64■□□□□ 0.57
LSM4-202ENST00000593564 JPT1Q9UK76 154 aa18.64■□□□□ 0.57
LSM4-202ENST00000593564 HUWE1Q7Z6Z7 4374 aaKnown RBP18.64■□□□□ 0.57
LSM4-202ENST00000593564 RUNX1Q01196 453 aa18.63■□□□□ 0.57
LSM4-202ENST00000593564 KIAA0141Q14154 515 aaPredicted RBP18.63■□□□□ 0.57
LSM4-202ENST00000593564 GNMTQ14749 295 aa18.63■□□□□ 0.57
LSM4-202ENST00000593564 SIGIRRQ6IA17 410 aa18.63■□□□□ 0.57
LSM4-202ENST00000593564 KCNIP1Q9NZI2 227 aa18.63■□□□□ 0.57
LSM4-202ENST00000593564 I3L521 148 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 CRTAPO75718 401 aaPredicted RBP18.62■□□□□ 0.57
LSM4-202ENST00000593564 HLA-DRB1P01911 266 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 MAS1P04201 325 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 OR8U8P0C7N1 319 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 CAPGP40121 348 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 INSL3P51460 131 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 TAS2R43P59537 309 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 ACTBP60709 375 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 TMEM65Q6PI78 240 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 ODF3L1Q8IXM7 274 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 OR52L2PQ8NGH6 319 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 DERL3Q96Q80 235 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 MRPL20Q9BYC9 149 aaKnown RBP18.62■□□□□ 0.57
LSM4-202ENST00000593564 KLK15Q9H2R5 256 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 OR51J1Q9H342 316 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 GNB4Q9HAV0 340 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 VSIG4Q9Y279 399 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 ZNF256Q9Y2P7 627 aaPredicted RBP18.62■□□□□ 0.57
LSM4-202ENST00000593564 WSB1Q9Y6I7 421 aa18.62■□□□□ 0.57
LSM4-202ENST00000593564 UBE2QL1A1L167 161 aa18.61■□□□□ 0.57
LSM4-202ENST00000593564 G3V318 75 aa18.61■□□□□ 0.57
LSM4-202ENST00000593564 BAG2O95816 211 aa18.61■□□□□ 0.57
LSM4-202ENST00000593564 IGLV1-40P01703 118 aa18.61■□□□□ 0.57
LSM4-202ENST00000593564 PPP1CCP36873 323 aaKnown RBP18.61■□□□□ 0.57
LSM4-202ENST00000593564 HTD2P86397 168 aa18.61■□□□□ 0.57
LSM4-202ENST00000593564 DOC2BQ14184 412 aa18.61■□□□□ 0.57
LSM4-202ENST00000593564 LY6G6FQ5SQ64 297 aa18.61■□□□□ 0.57
LSM4-202ENST00000593564 ASPHD1Q5U4P2 390 aa18.61■□□□□ 0.57
LSM4-202ENST00000593564 NKAIN3Q8N8D7 197 aa18.61■□□□□ 0.57
LSM4-202ENST00000593564 ZNF491Q8N8L2 437 aa18.61■□□□□ 0.57
LSM4-202ENST00000593564 OR1N2Q8NGR9 330 aa18.61■□□□□ 0.57
LSM4-202ENST00000593564 MRPL30Q8TCC3 161 aaKnown RBP18.61■□□□□ 0.57
LSM4-202ENST00000593564 CYYR1Q96J86 154 aa18.61■□□□□ 0.57
LSM4-202ENST00000593564 NABP2Q9BQ15 211 aa18.61■□□□□ 0.57
LSM4-202ENST00000593564 ATP6V0E1O15342 81 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms