RNA–Protein interactions for RNA: ENST00000592923.5

CNN1-210, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-210ENST00000592923 SLC25A6P12236 298 aa13.18□□□□□ -0.3
CNN1-210ENST00000592923 PVALBP20472 110 aaPredicted RBP13.18□□□□□ -0.3
CNN1-210ENST00000592923 BMP5P22003 454 aa13.18□□□□□ -0.3
CNN1-210ENST00000592923 CCKARP32238 428 aa13.18□□□□□ -0.3
CNN1-210ENST00000592923 COL10A1Q03692 680 aa13.18□□□□□ -0.3
CNN1-210ENST00000592923 ALKBH2Q6NS38 261 aa13.18□□□□□ -0.3
CNN1-210ENST00000592923 OR51H1Q8NH63 302 aa13.18□□□□□ -0.3
CNN1-210ENST00000592923 TMEM171Q8WVE6 324 aa13.18□□□□□ -0.3
CNN1-210ENST00000592923 SAT2Q96F10 170 aaPredicted RBP13.18□□□□□ -0.3
CNN1-210ENST00000592923 TOLLIPQ9H0E2 274 aa13.18□□□□□ -0.3
CNN1-210ENST00000592923 ARV1Q9H2C2 271 aa13.18□□□□□ -0.3
CNN1-210ENST00000592923 KCNS2Q9ULS6 477 aa13.18□□□□□ -0.3
CNN1-210ENST00000592923 ANKRD11Q6UB99 2663 aaPredicted RBP13.17□□□□□ -0.3
CNN1-210ENST00000592923 LGALS8O00214 317 aa13.17□□□□□ -0.3
CNN1-210ENST00000592923 H2AFB1P0C5Y9 115 aa13.17□□□□□ -0.3
CNN1-210ENST00000592923 MMP9P14780 707 aa13.17□□□□□ -0.3
CNN1-210ENST00000592923 CEACAM6P40199 344 aa13.17□□□□□ -0.3
CNN1-210ENST00000592923 HOXA4Q00056 320 aaPredicted RBP13.17□□□□□ -0.3
CNN1-210ENST00000592923 OR1L1Q8NH94 360 aa13.17□□□□□ -0.3
CNN1-210ENST00000592923 UBALD1Q8TB05 177 aa13.17□□□□□ -0.3
CNN1-210ENST00000592923 ARL11Q969Q4 196 aa13.17□□□□□ -0.3
CNN1-210ENST00000592923 MARC2Q969Z3 335 aa13.17□□□□□ -0.3
CNN1-210ENST00000592923 GALMQ96C23 342 aa13.17□□□□□ -0.3
CNN1-210ENST00000592923 MEGF10Q96KG7 1140 aa13.17□□□□□ -0.3
CNN1-210ENST00000592923 SMIM3Q9BZL3 60 aa13.17□□□□□ -0.3
CNN1-210ENST00000592923 PARP12Q9H0J9 701 aaKnown RBP13.17□□□□□ -0.3
CNN1-210ENST00000592923 RBM7Q9Y580 266 aaKnown RBP13.17□□□□□ -0.3
CNN1-210ENST00000592923 BORCS7-ASMTA0A0B4J1R7 106 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 A0A0G2JNJ9 132 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 ZNF705EA8MWA4 302 aaPredicted RBP13.16□□□□□ -0.3
CNN1-210ENST00000592923 PSG2P11465 335 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 EGR1P18146 543 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 GABRA2P47869 451 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 AESQ08117 197 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 FAM27E3Q08E93 113 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 MSMO1Q15800 293 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 TRAT1Q6PIZ9 186 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 CISD2Q8N5K1 135 aaKnown RBP13.16□□□□□ -0.3
CNN1-210ENST00000592923 SMIM8Q96KF7 97 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 ELOVL5Q9NYP7 299 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 Q9UFV3 132 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 NDRG3Q9UGV2 375 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 METRNQ9UJH8 293 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 ZNF835Q9Y2P0 537 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 PTPRZ1P23471 2315 aaPredicted RBP13.16□□□□□ -0.3
CNN1-210ENST00000592923 RNF212BA8MTL3 300 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 HBZP02008 142 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 IL2RGP31785 369 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 SULT1A2P50226 295 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 POLR2GP62487 172 aaKnown RBP eCLIP13.16□□□□□ -0.3
CNN1-210ENST00000592923 EWSR1Q01844 656 aaKnown RBP eCLIP13.16□□□□□ -0.3
CNN1-210ENST00000592923 ID3Q02535 119 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 KRBOX4Q5JUW0 171 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 GFRALQ6UXV0 394 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 OR2C3Q8N628 320 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 DRAM1Q8N682 238 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 CD177Q8N6Q3 437 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 ZBTB34Q8NCN2 500 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 LSM10Q969L4 123 aaKnown RBP13.16□□□□□ -0.3
CNN1-210ENST00000592923 BSCL2Q96G97 398 aaPredicted RBP13.16□□□□□ -0.3
CNN1-210ENST00000592923 OR2V2Q96R30 315 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 MMP26Q9NRE1 261 aa13.16□□□□□ -0.3
CNN1-210ENST00000592923 A0A1B0GU03 582 aa13.15□□□□□ -0.3
CNN1-210ENST00000592923 SSSCA1O60232 199 aa13.15□□□□□ -0.3
CNN1-210ENST00000592923 PITX3O75364 302 aa13.15□□□□□ -0.3
CNN1-210ENST00000592923 APOC3P02656 99 aa13.15□□□□□ -0.3
CNN1-210ENST00000592923 OR8U9P0C7N5 309 aa13.15□□□□□ -0.3
CNN1-210ENST00000592923 CD40P25942 277 aa13.15□□□□□ -0.3
CNN1-210ENST00000592923 IL34Q6ZMJ4 242 aa13.15□□□□□ -0.3
CNN1-210ENST00000592923 ZNF645Q8N7E2 425 aa13.15□□□□□ -0.3
CNN1-210ENST00000592923 OR8U1Q8NH10 309 aa13.15□□□□□ -0.3
CNN1-210ENST00000592923 LRRC46Q96FV0 321 aa13.15□□□□□ -0.3
CNN1-210ENST00000592923 LURAP1Q96LR2 239 aa13.15□□□□□ -0.3
CNN1-210ENST00000592923 PLEKHF2Q9H8W4 249 aa13.15□□□□□ -0.3
CNN1-210ENST00000592923 LYRM2Q9NU23 88 aaPredicted RBP13.15□□□□□ -0.3
CNN1-210ENST00000592923 PPP1R3CQ9UQK1 317 aa13.15□□□□□ -0.3
CNN1-210ENST00000592923 MSRB2Q9Y3D2 182 aa13.15□□□□□ -0.3
CNN1-210ENST00000592923 ZNF737O75373 536 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 TFF1P04155 84 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 PRDX2P32119 198 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 GATA4P43694 442 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 CTAG1AP78358 180 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 MST1LQ2TV78 715 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 CXorf66Q5JRM2 361 aaPredicted RBP13.14□□□□□ -0.31
CNN1-210ENST00000592923 VHLLQ6RSH7 139 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 LINC00518Q8N0U6 118 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 NUP37Q8NFH4 326 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 MRGPRDQ8TDS7 321 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 GINS3Q9BRX5 216 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 NKX6-2Q9C056 277 aaPredicted RBP13.14□□□□□ -0.31
CNN1-210ENST00000592923 MS4A7Q9GZW8 240 aaPredicted RBP13.14□□□□□ -0.31
CNN1-210ENST00000592923 SLC25A31Q9H0C2 315 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 WFDC1Q9HC57 220 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 ACACAQ13085 2346 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 MGAQ8IWI9 3026 aa13.14□□□□□ -0.31
CNN1-210ENST00000592923 IGKV1D-17A0A075B6S4 117 aa13.13□□□□□ -0.31
CNN1-210ENST00000592923 A0A0G2JRQ6 117 aa13.13□□□□□ -0.31
CNN1-210ENST00000592923 IGKV1-39P01597 117 aa13.13□□□□□ -0.31
CNN1-210ENST00000592923 IGKV1D-39P04432 117 aa13.13□□□□□ -0.31
CNN1-210ENST00000592923 SELENOVP59797 346 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms