RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 UQCC1Q9NVA1 299 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 KBTBD11-OT1A0A1B0GTJ5 212 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 A0A1B0GU03 582 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 PSMB11A5LHX3 300 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 OR4C45A6NMZ5 311 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 ZFPL1O95159 310 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 RPL15P61313 204 aaKnown RBP5.35□□□□□ -1.55
SMAD4-212ENST00000591126 LRRC37A5PQ49AS3 106 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 AQP3Q92482 292 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 USMG5Q96IX5 58 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 PLA2G12AQ9BZM1 189 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 ARL6Q9H0F7 186 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 RABAC1Q9UI14 185 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 FAM90A26D6RGX4 464 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 CDC42EP2O14613 210 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 ZNF250P15622 560 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 TPPP2P59282 170 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 LY6EQ16553 131 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 ZNF660Q6AZW8 331 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-212ENST00000591126 OR8I2Q8N0Y5 310 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 ACY3Q96HD9 319 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 TRAF4Q9BUZ4 470 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-212ENST00000591126 C1QTNF4Q9BXJ3 329 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 TMEM133Q9H2Q1 129 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 PLAC1Q9HBJ0 212 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 POMT1Q9Y6A1 747 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 MYO10Q9HD67 2058 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 A0A0G2JMM0 328 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 C3orf85A0A1B0GTC6 90 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 A0A1W2PPB8 328 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 A0A1W2PRS3 328 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 SMIM30A4D0T7 59 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 KIR3DP1A8MWS1 328 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 RNF223E7ERA6 249 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 DUSP14O95147 198 aaKnown RBP5.35□□□□□ -1.55
SMAD4-212ENST00000591126 DUS4LO95620 317 aaKnown RBP5.35□□□□□ -1.55
SMAD4-212ENST00000591126 HBZP02008 142 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 TRGV3P03979 118 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 NPPCP23582 126 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 CR1LQ2VPA4 569 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 SPANXN5Q5MJ07 72 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 TEX38Q6PEX7 206 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 C1orf122Q6ZSJ8 110 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 GGNQ86UU5 652 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 ZNF843Q8N446 348 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 RBPMSQ93062 196 aaKnown RBP5.35□□□□□ -1.55
SMAD4-212ENST00000591126 C19orf24Q9BVV8 132 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 ZMAT4Q9H898 229 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 SERTAD4Q9NUC0 356 aa5.35□□□□□ -1.55
SMAD4-212ENST00000591126 H3BMQ9 156 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 FBXO24O75426 580 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 TTRP02766 147 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 CD55P08174 381 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 NCS1P62166 190 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 PSG9Q00887 426 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 AESQ08117 197 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 ETV3LQ6ZN32 361 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 TMEM182Q6ZP80 229 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-212ENST00000591126 PPP1R27Q86WC6 154 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 RXFP4Q8TDU9 374 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 MS4A3Q96HJ5 214 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 FOXC2Q99958 501 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 NAA60Q9H7X0 242 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 SIRT7Q9NRC8 400 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 LHFPL6Q9Y693 200 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 TMEM235A6NFC5 223 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 UMAD1C9J7I0 102 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 TMEM178BH3BS89 294 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 J3QR06 171 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 MPDU1O75352 247 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 MMP9P14780 707 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 CHATP28329 748 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 CLDN12P56749 244 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 POLR2GP62487 172 aaKnown RBP eCLIP5.34□□□□□ -1.55
SMAD4-212ENST00000591126 FNDC7Q5VTL7 733 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 CST9LP1Q5W188 147 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 OR8G2PQ6IF36 304 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 WDFY2Q96P53 400 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 DMRTA2Q96SC8 542 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 MFFQ9GZY8 342 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 C19orf12Q9NSK7 152 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 RBFOX1Q9NWB1 397 aaKnown RBP5.34□□□□□ -1.55
SMAD4-212ENST00000591126 ATG2BQ96BY7 2078 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 ETV2O00321 342 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-212ENST00000591126 IGHV1-46P01743 117 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 OR13C7P0DN81 318 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 RPL7P18124 248 aaKnown RBP5.34□□□□□ -1.55
SMAD4-212ENST00000591126 MMP15P51511 669 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 SPCS3P61009 180 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 PSG7Q13046 419 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 WDR25Q64LD2 544 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-212ENST00000591126 LEMD1Q68G75 181 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 LINC00114Q6XXX2 140 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 SIAH3Q8IW03 269 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 OR5B3Q8NH48 314 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 APH1BQ8WW43 257 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 MARC2Q969Z3 335 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 ARHGAP5-AS1Q96IT6 56 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 FAAP24Q9BTP7 215 aa5.34□□□□□ -1.55
SMAD4-212ENST00000591126 GSX2Q9BZM3 304 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms