RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 FXYD6Q9H0Q3 95 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 IFT46Q9NQC8 304 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 TMEM100Q9NV29 134 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 TAAR3PQ9P1P4 343 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 RNF7Q9UBF6 113 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 RPUSD1Q9UJJ7 312 aaKnown RBP6.31□□□□□ -1.4
SMAD4-209ENST00000589941 PRELID3BQ9Y3B1 194 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 POMT1Q9Y6A1 747 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 TRAV18A0A075B6X5 111 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 NPIPB13A6NJU9 1138 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 CEACAM18A8MTB9 384 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 NPIPB4C9JG80 1138 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 BLOC1S5-TXNDC5H3BN57 136 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 TEX46H3BTG2 121 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 NPIPB7O75200 414 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 KDM4BO94953 1096 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 SIX6O95475 246 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 RENP00797 406 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 MT-ATP6P00846 226 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 SFTPBP07988 381 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 LYL1P12980 280 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 TBPP20226 339 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 HOXD3P31249 432 aaPredicted RBP6.3□□□□□ -1.4
SMAD4-209ENST00000589941 GLRXP35754 106 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 SOX2P48431 317 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 UBE2MP61081 183 aaKnown RBP6.3□□□□□ -1.4
SMAD4-209ENST00000589941 ARF1P84077 181 aaKnown RBP6.3□□□□□ -1.4
SMAD4-209ENST00000589941 MEF2DQ14814 521 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 C2orf76Q3KRA6 126 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 MORN5Q5VZ52 161 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 TMEM225Q6GV28 225 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 CFAP77Q6ZQR2 320 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 SLC25A42Q86VD7 318 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 CATSPERDQ86XM0 798 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 LINC00518Q8N0U6 118 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 ZNF614Q8N883 585 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 OR9K2Q8NGE7 335 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 OR51D1Q8NGF3 324 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 OR13C8Q8NGS7 320 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 TNFAIP8L1Q8WVP5 186 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 GLMPQ8WWB7 406 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 SSMEM1Q8WWF3 244 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 AQP3Q92482 292 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 CCL17Q92583 94 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 ZNF75AQ96N20 296 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 TSSK2Q96PF2 358 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 AMELYQ99218 206 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 CHST6Q9GZX3 395 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 WDR13Q9H1Z4 485 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 LAMP5Q9UJQ1 280 aa6.3□□□□□ -1.4
SMAD4-209ENST00000589941 CARHSP1Q9Y2V2 147 aaKnown RBP6.3□□□□□ -1.4
SMAD4-209ENST00000589941 TRAV36DV7A0A075B6V5 113 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 A0A0B4J2A0 478 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 IGHV2-70DA0A0C4DH43 119 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 OR5H14A6NHG9 310 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 LGALS8O00214 317 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 TSPAN4O14817 238 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 DNPH1O43598 174 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 RPP14O95059 124 aaKnown RBP6.29□□□□□ -1.4
SMAD4-209ENST00000589941 RAB3DO95716 219 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 HLA-HP01893 362 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 RLN1P04808 185 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 PPIAL4GP0DN37 164 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 ZNF14P17017 642 aaPredicted RBP6.29□□□□□ -1.4
SMAD4-209ENST00000589941 TACR3P29371 465 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 GRPRP30550 384 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 QRFPP83859 136 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 DHRS2Q13268 280 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 MICBQ29980 383 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 HFEQ30201 348 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 ZNF260Q3ZCT1 412 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 PAN3Q58A45 887 aaKnown RBP6.29□□□□□ -1.4
SMAD4-209ENST00000589941 DHRS7BQ6IAN0 325 aaPredicted RBP6.29□□□□□ -1.4
SMAD4-209ENST00000589941 RAB12Q6IQ22 244 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 DEGS2Q6QHC5 323 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 ATRAIDQ6UW56 229 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 ACOT7LQ6ZUV0 252 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 LYG2Q86SG7 212 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 ZNF546Q86UE3 836 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 CCDC36Q8IYA8 594 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 PAQR4Q8N4S7 273 aaPredicted RBP6.29□□□□□ -1.4
SMAD4-209ENST00000589941 KLHDC1Q8N7A1 406 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 NKAIN3Q8N8D7 197 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 OR51A4Q8NGJ6 313 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 OR6N2Q8NGY6 317 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 MITD1Q8WV92 249 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 MRGPRFQ96AM1 343 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 OR51B6Q9H340 312 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 PATZ1Q9HBE1 687 aaKnown RBP6.29□□□□□ -1.4
SMAD4-209ENST00000589941 MRPL22Q9NWU5 206 aaKnown RBP6.29□□□□□ -1.4
SMAD4-209ENST00000589941 GRHPRQ9UBQ7 328 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 SHPKQ9UHJ6 478 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 ZNF346Q9UL40 294 aaKnown RBP6.29□□□□□ -1.4
SMAD4-209ENST00000589941 B9D1Q9UPM9 204 aa6.29□□□□□ -1.4
SMAD4-209ENST00000589941 TEX13DA0A0J9YY54 714 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-209ENST00000589941 A0A0U1RQK1 487 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 PRSS37A4D1T9 235 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 TVP23AA6NH52 213 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 ZNF264O43296 627 aa6.28□□□□□ -1.4
SMAD4-209ENST00000589941 MTRF1O75570 445 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms