RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 DOLPP1Q86YN1 238 aa12.74□□□□□ -0.37
SMARCA4-214ENST00000589677 CARFQ8N187 725 aa12.74□□□□□ -0.37
SMARCA4-214ENST00000589677 VSTM2AQ8TAG5 236 aa12.74□□□□□ -0.37
SMARCA4-214ENST00000589677 PLPPR2Q96GM1 343 aa12.74□□□□□ -0.37
SMARCA4-214ENST00000589677 LRRC61Q9BV99 259 aa12.74□□□□□ -0.37
SMARCA4-214ENST00000589677 DEFB127Q9H1M4 99 aa12.74□□□□□ -0.37
SMARCA4-214ENST00000589677 IGHV3-43A0A0B4J1X8 118 aa12.74□□□□□ -0.37
SMARCA4-214ENST00000589677 IGHV3-43DP0DP04 118 aa12.74□□□□□ -0.37
SMARCA4-214ENST00000589677 RPL7P18124 248 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-214ENST00000589677 UQCRFS1P47985 274 aa12.74□□□□□ -0.37
SMARCA4-214ENST00000589677 IBA57Q5T440 356 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-214ENST00000589677 MIEN1Q9BRT3 115 aa12.74□□□□□ -0.37
SMARCA4-214ENST00000589677 PRNDQ9UKY0 176 aa12.74□□□□□ -0.37
SMARCA4-214ENST00000589677 HPRT1P00492 218 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 C2orf68Q2NKX9 166 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 CXorf66Q5JRM2 361 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 C10orf113Q5VZT2 155 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 MARS2Q96GW9 593 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 SLC25A33Q9BSK2 321 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 PSMG3Q9BT73 122 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 QTRT1Q9BXR0 403 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 FAM90A26D6RGX4 464 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 SRP19P09132 144 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 PRSS53Q2L4Q9 553 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 SAPCD1Q5SSQ6 148 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 NPVFQ9HCQ7 196 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 LMO7DNF2Z398 122 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 FGF16O43320 207 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 BTF3P20290 206 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 OR52M1Q8NGK5 317 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 CLN8Q9UBY8 286 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 NPY1RP25929 384 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 NMUP48645 174 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 SELENOHQ8IZQ5 122 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 OR1B1Q8NGR6 318 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 TMEM45BQ96B21 275 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 ZNF576Q9H609 170 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 HEXA-AS1Q9H8Q6 139 aa12.73□□□□□ -0.37
SMARCA4-214ENST00000589677 IFI6P09912 130 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 TMEM187Q14656 261 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 RBKSQ9H477 322 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 LOC390937A0A1W2PQ73 354 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 M0R296 226 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 NPIPB7O75200 414 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 SLC23A3Q6PIS1 610 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 OR5A2Q8NGI9 324 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 OR2J1Q9GZK6 312 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 TMEM238LA0A1B0GVL6 79 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 A6NJY4 79 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 MYOZ3Q8TDC0 251 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 KISS1RQ969F8 398 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 AMELYQ99218 206 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 COA4Q9NYJ1 87 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 PXMP4Q9Y6I8 212 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 ARID1AO14497 2285 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 HLA-DRB1P01911 266 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 RAC3P60763 192 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 CXorf67Q86X51 503 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 SARAFQ96BY9 339 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 GNRHR2Q96P88 292 aa12.72□□□□□ -0.37
SMARCA4-214ENST00000589677 DPRXA6NFQ7 191 aa12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 H3BVH4 76 aa12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 UCP3P55916 312 aa12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 WIPI1Q5MNZ9 446 aaPredicted RBP12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 SLC35E4Q6ICL7 350 aa12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 OR1L1Q8NH94 360 aa12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 NRTNQ99748 197 aa12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 RNF122Q9H9V4 155 aa12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 A0A1B0GTI1 187 aa12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 MSGN1A6NI15 193 aa12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 J3QT63 122 aa12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 COL10A1Q03692 680 aa12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 TIMD4Q96H15 378 aa12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 CXXC4Q9H2H0 198 aa12.71□□□□□ -0.37
SMARCA4-214ENST00000589677 M0R1B8 84 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FGF5P12034 268 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 NIT1Q86X76 327 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 OR8B3Q8NGG8 313 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 Q8WTZ3 238 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 SERGEFQ9UGK8 458 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 COL4A1P02462 1669 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM90A10PA6NDY2 464 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM90A18PA6NE21 464 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM90A16PA6NEW6 464 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM90A20PA6NIJ5 464 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM90A8PA6NJQ4 464 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM90A7PA6NKC0 464 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM90A22PA8MWA6 464 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM90A12PA8MX19 464 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM90A5PA8MXJ8 464 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM90A23PA8MXZ1 464 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM90A15PP0C7V4 464 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM90A13PP0C7W8 464 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM90A14PP0C7W9 464 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM90A24PP0C7X0 464 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 GZMHP20718 246 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 SRIP30626 198 aa12.71□□□□□ -0.38
SMARCA4-214ENST00000589677 MRPS11P82912 194 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms