RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 RDH8Q9NYR8 311 aa11.94□□□□□ -0.5
NPC1-207ENST00000588867 COPZ2Q9P299 210 aa11.94□□□□□ -0.5
NPC1-207ENST00000588867 ONECUT1Q9UBC0 465 aa11.94□□□□□ -0.5
NPC1-207ENST00000588867 MED13LQ71F56 2210 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 FAM172BPA6NC97 362 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 KIAA1324LA8MWY0 1029 aaPredicted RBP11.93□□□□□ -0.5
NPC1-207ENST00000588867 FAM157AC9JC47 383 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 F2RL2O00254 374 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 NDUFB6O95139 128 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 PPYP01298 95 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 LIPFP07098 398 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 RAB25P57735 213 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 HERV-K104P61576 105 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 AADACL3Q5VUY0 350 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 H1FOOQ8IZA3 346 aaPredicted RBP11.93□□□□□ -0.5
NPC1-207ENST00000588867 C8orf46Q8TAG6 207 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 MARCH1Q8TCQ1 289 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 TOMM40LQ969M1 308 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 FLVCR2Q9UPI3 526 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 RBM7Q9Y580 266 aaKnown RBP11.93□□□□□ -0.5
NPC1-207ENST00000588867 UNC79Q9P2D8 2635 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 FOXH1O75593 365 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 RLN1P04808 185 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 BAMBIQ13145 260 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 PRSS57Q6UWY2 283 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 LHFPL1Q86WI0 220 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 MINDY2Q8NBR6 621 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 LY6G5BQ8NDX9 201 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 LEAP2Q969E1 77 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 MRGPRFQ96AM1 343 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 Q96MF0 132 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 SLC25A21Q9BQT8 299 aaPredicted RBP11.93□□□□□ -0.5
NPC1-207ENST00000588867 NUBP2Q9Y5Y2 271 aa11.93□□□□□ -0.5
NPC1-207ENST00000588867 RNF223E7ERA6 249 aa11.92□□□□□ -0.5
NPC1-207ENST00000588867 ARPC1BO15143 372 aaKnown RBP11.92□□□□□ -0.5
NPC1-207ENST00000588867 PGAM2P15259 253 aa11.92□□□□□ -0.5
NPC1-207ENST00000588867 DLX6P56179 175 aa11.92□□□□□ -0.5
NPC1-207ENST00000588867 LOXL3P58215 753 aa11.92□□□□□ -0.5
NPC1-207ENST00000588867 ARF6P62330 175 aa11.92□□□□□ -0.5
NPC1-207ENST00000588867 HEPN1Q6WQI6 88 aa11.92□□□□□ -0.5
NPC1-207ENST00000588867 PARP12Q9H0J9 701 aaKnown RBP11.92□□□□□ -0.5
NPC1-207ENST00000588867 C20orf85Q9H1P6 137 aa11.92□□□□□ -0.5
NPC1-207ENST00000588867 LINC00574Q9H8X3 128 aa11.92□□□□□ -0.5
NPC1-207ENST00000588867 JPT1Q9UK76 154 aa11.92□□□□□ -0.5
NPC1-207ENST00000588867 OR2W1Q9Y3N9 320 aa11.92□□□□□ -0.5
NPC1-207ENST00000588867 A8MXK9 166 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 ENSAO43768 121 aaKnown RBP11.91□□□□□ -0.5
NPC1-207ENST00000588867 TUSC2O75896 110 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 H2AFB2P0C5Z0 115 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 MORN2Q502X0 79 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 UTF1Q5T230 341 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 TMED4Q7Z7H5 227 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 SECTM1Q8WVN6 248 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 UPRTQ96BW1 309 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 MOB3AQ96BX8 217 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 BEX2Q9BXY8 128 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 REG4Q9BYZ8 158 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 BEX1Q9HBH7 125 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 MMP26Q9NRE1 261 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 GFOD1Q9NXC2 390 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 hCG_1809904A0A1W2PP81 198 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 A0A1W2PPE2 198 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 A0A1W2PR64 198 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 A0A1W2PRV1 198 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 C17orf98A8MV24 154 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 RGS11O94810 467 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 OR8U9P0C7N5 309 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 KRTAP1-3Q8IUG1 177 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 C11orf42Q8N5U0 333 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 MAPK1IP1LQ8NDC0 245 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 OR8U1Q8NH10 309 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 CREB3L1Q96BA8 519 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 SUCNR1Q9BXA5 334 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 RNF150Q9ULK6 438 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 VSIG4Q9Y279 399 aa11.91□□□□□ -0.5
NPC1-207ENST00000588867 ASH1LQ9NR48 2969 aaKnown RBP11.91□□□□□ -0.5
NPC1-207ENST00000588867 IGKV1D-13A0A0B4J2D9 117 aa11.9□□□□□ -0.5
NPC1-207ENST00000588867 INMT-MINDY4F8WBC2 141 aa11.9□□□□□ -0.5
NPC1-207ENST00000588867 YPEL1O60688 119 aa11.9□□□□□ -0.5
NPC1-207ENST00000588867 IGHV1-8P0DP01 117 aa11.9□□□□□ -0.5
NPC1-207ENST00000588867 IGKV1-13P0DP09 117 aa11.9□□□□□ -0.5
NPC1-207ENST00000588867 PI3P19957 117 aa11.9□□□□□ -0.5
NPC1-207ENST00000588867 GNG10P50151 68 aa11.9□□□□□ -0.5
NPC1-207ENST00000588867 LUMP51884 338 aaPredicted RBP11.9□□□□□ -0.5
NPC1-207ENST00000588867 OR10A7Q8NGE5 316 aa11.9□□□□□ -0.5
NPC1-207ENST00000588867 OR52M1Q8NGK5 317 aa11.9□□□□□ -0.5
NPC1-207ENST00000588867 SCGB3A2Q96PL1 93 aa11.9□□□□□ -0.5
NPC1-207ENST00000588867 YPEL2Q96QA6 119 aa11.9□□□□□ -0.5
NPC1-207ENST00000588867 SLC5A7Q9GZV3 580 aa11.9□□□□□ -0.5
NPC1-207ENST00000588867 FXYD6Q9H0Q3 95 aa11.9□□□□□ -0.5
NPC1-207ENST00000588867 MAP1AP78559 2803 aaPredicted RBP11.9□□□□□ -0.5
NPC1-207ENST00000588867 PRRC2AP48634 2157 aaKnown RBP11.9□□□□□ -0.51
NPC1-207ENST00000588867 ITPR2Q14571 2701 aa11.9□□□□□ -0.51
NPC1-207ENST00000588867 IGHV2-70DA0A0C4DH43 119 aa11.89□□□□□ -0.51
NPC1-207ENST00000588867 A0A1W2PPE3 182 aa11.89□□□□□ -0.51
NPC1-207ENST00000588867 DLX1P56177 255 aa11.89□□□□□ -0.51
NPC1-207ENST00000588867 PRB3Q04118 309 aaPredicted RBP11.89□□□□□ -0.51
NPC1-207ENST00000588867 OR2AK2Q8NG84 335 aa11.89□□□□□ -0.51
NPC1-207ENST00000588867 MARVELD1Q9BSK0 173 aa11.89□□□□□ -0.51
NPC1-207ENST00000588867 GPR132Q9UNW8 380 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms