RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CELSR2Q9HCU4 2923 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 F2RL2O00254 374 aa21.52■■□□□ 1.04
SCAMP4-210ENST00000588555 MEF2CQ06413 473 aaPredicted RBP21.52■■□□□ 1.04
SCAMP4-210ENST00000588555 OR11H7Q8NGC8 314 aa21.52■■□□□ 1.04
SCAMP4-210ENST00000588555 ST6GAL2Q96JF0 529 aa21.52■■□□□ 1.04
SCAMP4-210ENST00000588555 LINC00574Q9H8X3 128 aa21.52■■□□□ 1.04
SCAMP4-210ENST00000588555 LINC00312Q9Y6C7 94 aa21.52■■□□□ 1.04
SCAMP4-210ENST00000588555 KBTBD11-OT1A0A1B0GTJ5 212 aa21.51■■□□□ 1.03
SCAMP4-210ENST00000588555 CCNKO75909 580 aa21.51■■□□□ 1.03
SCAMP4-210ENST00000588555 SULT1A3P0DMM9 295 aa21.51■■□□□ 1.03
SCAMP4-210ENST00000588555 SULT1A4P0DMN0 295 aa21.51■■□□□ 1.03
SCAMP4-210ENST00000588555 SECTM1Q8WVN6 248 aa21.51■■□□□ 1.03
SCAMP4-210ENST00000588555 ZNF486Q96H40 463 aaPredicted RBP21.51■■□□□ 1.03
SCAMP4-210ENST00000588555 CLN8Q9UBY8 286 aa21.51■■□□□ 1.03
SCAMP4-210ENST00000588555 hADV38S2A0JD32 116 aa21.51■■□□□ 1.03
SCAMP4-210ENST00000588555 PIGPP57054 158 aa21.51■■□□□ 1.03
SCAMP4-210ENST00000588555 RPL31P62899 125 aaKnown RBP21.51■■□□□ 1.03
SCAMP4-210ENST00000588555 LPCAT3Q6P1A2 487 aa21.51■■□□□ 1.03
SCAMP4-210ENST00000588555 SLC5A7Q9GZV3 580 aa21.51■■□□□ 1.03
SCAMP4-210ENST00000588555 OR2S2Q9NQN1 319 aa21.51■■□□□ 1.03
SCAMP4-210ENST00000588555 SLC2A9Q9NRM0 540 aa21.51■■□□□ 1.03
SCAMP4-210ENST00000588555 SPG11Q96JI7 2443 aa21.5■■□□□ 1.03
SCAMP4-210ENST00000588555 IGHV4-39P01824 125 aa21.5■■□□□ 1.03
SCAMP4-210ENST00000588555 CXCL3P19876 107 aa21.5■■□□□ 1.03
SCAMP4-210ENST00000588555 VAMP1P23763 118 aa21.5■■□□□ 1.03
SCAMP4-210ENST00000588555 COL8A1P27658 744 aa21.5■■□□□ 1.03
SCAMP4-210ENST00000588555 LOXL3P58215 753 aa21.5■■□□□ 1.03
SCAMP4-210ENST00000588555 ZNF818PQ6ZRF7 136 aa21.5■■□□□ 1.03
SCAMP4-210ENST00000588555 OR10V1Q8NGI7 309 aa21.5■■□□□ 1.03
SCAMP4-210ENST00000588555 UBE2J1Q9Y385 318 aaPredicted RBP21.5■■□□□ 1.03
SCAMP4-210ENST00000588555 CRYM-AS1A6NIL9 109 aa21.49■■□□□ 1.03
SCAMP4-210ENST00000588555 ZNF729A6NN14 1252 aaPredicted RBP21.49■■□□□ 1.03
SCAMP4-210ENST00000588555 A8MV72 311 aaPredicted RBP21.49■■□□□ 1.03
SCAMP4-210ENST00000588555 PPP1CCP36873 323 aaKnown RBP21.49■■□□□ 1.03
SCAMP4-210ENST00000588555 ZNF273Q14593 569 aa21.49■■□□□ 1.03
SCAMP4-210ENST00000588555 PPP1R14BQ96C90 147 aa21.49■■□□□ 1.03
SCAMP4-210ENST00000588555 IGHV3-43A0A0B4J1X8 118 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 SFT2D2O95562 160 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 DUS4LO95620 317 aaKnown RBP21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 IGHV3-43DP0DP04 118 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 OMGP23515 440 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 LUMP51884 338 aaPredicted RBP21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 ABCA11PQ4W5N1 156 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 PHLDA2Q53GA4 152 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 C12orf45Q8N5I9 185 aaPredicted RBP21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 MITD1Q8WV92 249 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 H1FXQ92522 213 aaKnown RBP21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 CCL28Q9NRJ3 127 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 TAS2R3Q9NYW6 316 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 MIOXQ9UGB7 285 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 JPT1Q9UK76 154 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 ASH1LQ9NR48 2969 aaKnown RBP21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 WNT2P09544 360 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 TMEM200BQ69YZ2 307 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 SPICQ8N5J4 248 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 NINJ1Q92982 152 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 LPAR3Q9UBY5 353 aa21.48■■□□□ 1.03
SCAMP4-210ENST00000588555 IGLV2-14P01704 120 aa21.47■■□□□ 1.03
SCAMP4-210ENST00000588555 GPR6P46095 362 aaPredicted RBP21.47■■□□□ 1.03
SCAMP4-210ENST00000588555 CD83Q01151 205 aa21.47■■□□□ 1.03
SCAMP4-210ENST00000588555 ZNF525Q8N782 197 aa21.47■■□□□ 1.03
SCAMP4-210ENST00000588555 OR2AK2Q8NG84 335 aa21.47■■□□□ 1.03
SCAMP4-210ENST00000588555 RTN4IP1Q8WWV3 396 aaPredicted RBP21.47■■□□□ 1.03
SCAMP4-210ENST00000588555 RANGRFQ9HD47 186 aaPredicted RBP21.47■■□□□ 1.03
SCAMP4-210ENST00000588555 RAB9BQ9NP90 201 aa21.47■■□□□ 1.03
SCAMP4-210ENST00000588555 GPR31O00270 319 aa21.46■■□□□ 1.03
SCAMP4-210ENST00000588555 RND3P61587 244 aa21.46■■□□□ 1.03
SCAMP4-210ENST00000588555 LTC4SQ16873 150 aa21.46■■□□□ 1.03
SCAMP4-210ENST00000588555 C2orf68Q2NKX9 166 aa21.46■■□□□ 1.03
SCAMP4-210ENST00000588555 CASTOR1Q8WTX7 329 aa21.46■■□□□ 1.03
SCAMP4-210ENST00000588555 NEIL1Q96FI4 390 aaPredicted RBP21.46■■□□□ 1.03
SCAMP4-210ENST00000588555 OR8U9P0C7N5 309 aa21.46■■□□□ 1.03
SCAMP4-210ENST00000588555 SGPP2Q8IWX5 399 aa21.46■■□□□ 1.03
SCAMP4-210ENST00000588555 OR8B3Q8NGG8 313 aa21.46■■□□□ 1.03
SCAMP4-210ENST00000588555 OR8U1Q8NH10 309 aa21.46■■□□□ 1.03
SCAMP4-210ENST00000588555 FYTTD1Q96QD9 318 aaKnown RBP21.46■■□□□ 1.03
SCAMP4-210ENST00000588555 OR8B2Q96RD0 313 aa21.46■■□□□ 1.03
SCAMP4-210ENST00000588555 NAA60Q9H7X0 242 aa21.46■■□□□ 1.03
SCAMP4-210ENST00000588555 MALRD1Q5VYJ5 2156 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 TRBV23-1A0A0A0MS06 115 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 HSD17B6O14756 317 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 GPR37O15354 613 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 YPEL1O60688 119 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 CD34P28906 385 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 SLC9A3R2Q15599 337 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 MORN2Q502X0 79 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 NLRC3Q7RTR2 1065 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 FAM185AQ8N0U4 392 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 BVESQ8NE79 360 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 GALNT14Q96FL9 552 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 YPEL2Q96QA6 119 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 PATZ1Q9HBE1 687 aaKnown RBP21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 GNG12Q9UBI6 72 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 DOCK11Q5JSL3 2073 aa21.45■■□□□ 1.02
SCAMP4-210ENST00000588555 TEX13DA0A0J9YY54 714 aaPredicted RBP21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 F5H0A9 414 aaPredicted RBP21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 BOLA2-SMG1P6H3BVE0 249 aa21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 MMP23AO75900 390 aa21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 UTF1Q5T230 341 aa21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 WDR25Q64LD2 544 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms