RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 GGNQ86UU5 652 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 LILRB2Q8N423 598 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 OR10J5Q8NHC4 309 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 TAF15Q92804 592 aaKnown RBP eCLIP7.41□□□□□ -1.22
BDNF-219ENST00000584049 LHX4Q969G2 390 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 TMEM45BQ96B21 275 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 BTF3L4Q96K17 158 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 HIST1H2AAQ96QV6 131 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 MANBALQ9NQG1 85 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 LAMP3Q9UQV4 416 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 XKRY2A2RUG3 117 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 SLC33A1O00400 549 aaPredicted RBP7.41□□□□□ -1.22
BDNF-219ENST00000584049 COX6A1P12074 109 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 FGF8P55075 233 aaPredicted RBP7.41□□□□□ -1.22
BDNF-219ENST00000584049 RPL23P62829 140 aaKnown RBP7.41□□□□□ -1.22
BDNF-219ENST00000584049 MOB1BQ7L9L4 216 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 DMRTC2Q8IXT2 367 aaPredicted RBP7.41□□□□□ -1.22
BDNF-219ENST00000584049 ZNF664Q8N3J9 261 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 OR10V1Q8NGI7 309 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 ADGRG7Q96K78 797 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 FGF23Q9GZV9 251 aaPredicted RBP7.41□□□□□ -1.22
BDNF-219ENST00000584049 SLC39A9Q9NUM3 307 aa7.41□□□□□ -1.22
BDNF-219ENST00000584049 A0A1W2PQM1 296 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 TNFSF12O43508 249 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 GGCTO75223 188 aaKnown RBP7.4□□□□□ -1.22
BDNF-219ENST00000584049 CELA2AP08217 269 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 COX5BP10606 129 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 APLNRP35414 380 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 SRP14P37108 136 aaKnown RBP7.4□□□□□ -1.22
BDNF-219ENST00000584049 GALR1P47211 349 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 HNF4GQ14541 408 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 Q6ZRM9 215 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 TMEM18Q96B42 140 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 MISP3Q96FF7 219 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 SGCZQ96LD1 299 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 CCDC74BQ96LY2 380 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 DUSP23Q9BVJ7 150 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 LIN7CQ9NUP9 197 aaKnown RBP7.4□□□□□ -1.22
BDNF-219ENST00000584049 MTCH1Q9NZJ7 389 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 CTXND1A0A1B0GTU2 59 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 VENTXO95231 258 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 IGKV1-39P01597 117 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 MBP02144 154 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 IGKV1D-39P04432 117 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 FGF5P12034 268 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 HOXA6P31267 233 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 PSMB3P49720 205 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 MLF1P58340 268 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 SLC10A1Q14973 349 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 ACTL10Q5JWF8 245 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 CISD2Q8N5K1 135 aaKnown RBP7.4□□□□□ -1.22
BDNF-219ENST00000584049 OR5A2Q8NGI9 324 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 OR51H1Q8NH63 302 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 OR4C12Q96R67 309 aa7.4□□□□□ -1.22
BDNF-219ENST00000584049 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.4□□□□□ -1.23
BDNF-219ENST00000584049 ATP6V1FQ16864 119 aa7.4□□□□□ -1.23
BDNF-219ENST00000584049 C5orf24Q7Z6I8 188 aa7.4□□□□□ -1.23
BDNF-219ENST00000584049 RPS19BP1Q86WX3 136 aaKnown RBP7.4□□□□□ -1.23
BDNF-219ENST00000584049 PSMF1Q92530 271 aa7.4□□□□□ -1.23
BDNF-219ENST00000584049 NEU1Q99519 415 aa7.4□□□□□ -1.23
BDNF-219ENST00000584049 DDA1Q9BW61 102 aa7.4□□□□□ -1.23
BDNF-219ENST00000584049 OR51I2Q9H344 312 aa7.4□□□□□ -1.23
BDNF-219ENST00000584049 IGKV1-5P01602 117 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 IAPPP10997 89 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 NUBP1P53384 320 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 CCL7P80098 99 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 LCN2P80188 198 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 SLC38A11Q08AI6 406 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 ZNF468Q5VIY5 522 aaPredicted RBP7.39□□□□□ -1.23
BDNF-219ENST00000584049 TMEM14EPQ6UXP3 125 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 ZNF66Q6ZN08 573 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 BEND4Q6ZU67 534 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 CPEB3Q8NE35 698 aaKnown RBP7.39□□□□□ -1.23
BDNF-219ENST00000584049 TMEM9BQ9NQ34 198 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 CXCL13O43927 109 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 CYTIPO60759 359 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 SS18L1O75177 396 aaPredicted RBP7.39□□□□□ -1.23
BDNF-219ENST00000584049 GPM6AP51674 278 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 IQCJQ1A5X6 159 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 GUSBP11Q6P575 273 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 MRPL21Q7Z2W9 205 aaKnown RBP7.39□□□□□ -1.23
BDNF-219ENST00000584049 HS3ST6Q96QI5 342 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 LINC00470Q9BZP3 86 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 ERRFI1Q9UJM3 462 aaPredicted RBP7.39□□□□□ -1.23
BDNF-219ENST00000584049 MRPS18CQ9Y3D5 142 aaKnown RBP7.39□□□□□ -1.23
BDNF-219ENST00000584049 G3V3Y1 287 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 UMODP07911 640 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 CD55P08174 381 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 NUTF2P61970 127 aaKnown RBP7.39□□□□□ -1.23
BDNF-219ENST00000584049 BATF2Q8N1L9 274 aa7.39□□□□□ -1.23
BDNF-219ENST00000584049 RPP25LQ8N5L8 163 aaKnown RBP7.39□□□□□ -1.23
BDNF-219ENST00000584049 APOBEC3DQ96AK3 386 aaPredicted RBP7.39□□□□□ -1.23
BDNF-219ENST00000584049 DNAH14Q0VDD8 3507 aa7.38□□□□□ -1.23
BDNF-219ENST00000584049 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.38□□□□□ -1.23
BDNF-219ENST00000584049 B4E171 279 aa7.38□□□□□ -1.23
BDNF-219ENST00000584049 GZMHP20718 246 aa7.38□□□□□ -1.23
BDNF-219ENST00000584049 MDKP21741 143 aaPredicted RBP7.38□□□□□ -1.23
BDNF-219ENST00000584049 TSPAN7P41732 249 aa7.38□□□□□ -1.23
BDNF-219ENST00000584049 IL11RAQ14626 422 aa7.38□□□□□ -1.23
BDNF-219ENST00000584049 OR2T10Q8NGZ9 312 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms