RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 JAM3Q9BX67 310 aa6.34□□□□□ -1.39
MSI2-218ENST00000583821 GPR61Q9BZJ8 451 aa6.34□□□□□ -1.39
MSI2-218ENST00000583821 ING4Q9UNL4 249 aa6.34□□□□□ -1.39
MSI2-218ENST00000583821 ST3GAL6Q9Y274 331 aa6.34□□□□□ -1.39
MSI2-218ENST00000583821 GMPPBQ9Y5P6 360 aa6.34□□□□□ -1.39
MSI2-218ENST00000583821 DNAH1Q9P2D7 4330 aa6.34□□□□□ -1.4
MSI2-218ENST00000583821 KRTAP9-6A0A140TA67 174 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 TMEM30CPA0ZSE6 113 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 ANKRD34BA5PLL1 514 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 CCL24O00175 119 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 SDCBPO00560 298 aaPredicted RBP6.33□□□□□ -1.4
MSI2-218ENST00000583821 OR7C1O76099 320 aaPredicted RBP6.33□□□□□ -1.4
MSI2-218ENST00000583821 TNFAIP8O95379 198 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 LIMS3P0CW19 117 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 LIMS4P0CW20 117 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 SERPINA2P20848 420 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 MYCNOSP40205 109 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 ETV1P50549 477 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 GBX2P52951 348 aaPredicted RBP6.33□□□□□ -1.4
MSI2-218ENST00000583821 SLC35B1P78383 322 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 S100A12P80511 92 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 DGCR2P98153 550 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 PAX5Q02548 391 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 ZNF816Q0VGE8 651 aaPredicted RBP6.33□□□□□ -1.4
MSI2-218ENST00000583821 SMN1Q16637 294 aaKnown RBP6.33□□□□□ -1.4
MSI2-218ENST00000583821 DDI2Q5TDH0 399 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 FAM122CQ6P4D5 195 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 ASCL4Q6XD76 172 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 C5orf24Q7Z6I8 188 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 FOXRED2Q8IWF2 684 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 IZUMO1Q8IYV9 350 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 LINC00469Q8N7U9 141 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 Q8N9W7 124 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 TMEM104Q8NE00 496 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 Q8NFD4 153 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 OR10V1Q8NGI7 309 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 ARL11Q969Q4 196 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 ASCL2Q99929 193 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 BARHL1Q9BZE3 327 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 NCOR1P1Q9H4R4 102 aa6.33□□□□□ -1.4
MSI2-218ENST00000583821 SIRT4Q9Y6E7 314 aaPredicted RBP6.33□□□□□ -1.4
MSI2-218ENST00000583821 LOC105371267A0A1B0GV96 52 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 C12orf77C9JDV5 145 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 AP4M1O00189 453 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 SHOXO15266 292 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 MAGEB3O15480 346 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 FADS2O95864 444 aaKnown RBP6.32□□□□□ -1.4
MSI2-218ENST00000583821 LALBAP00709 142 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 GAPDHP04406 335 aaKnown RBP6.32□□□□□ -1.4
MSI2-218ENST00000583821 MYF6P23409 242 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 KCNJ3P48549 501 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 F2RL1P55085 397 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 GNG2P59768 71 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 CFHR3Q02985 330 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 GPR50Q13585 617 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 EBI3Q14213 229 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 SLC22A6Q4U2R8 563 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 ATAD3CQ5T2N8 411 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 OR2G6Q5TZ20 316 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 ZNF497Q6ZNH5 498 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 TGIF2LXQ8IUE1 241 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 ZFP41Q8N8Y5 198 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 ZNF439Q8NDP4 499 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 OR10A7Q8NGE5 316 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 OR2T10Q8NGZ9 312 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 OR52N1Q8NH53 320 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 OR1L1Q8NH94 360 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 RHOXF1Q8NHV9 184 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 GRPEL2Q8TAA5 225 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 NEK7Q8TDX7 302 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 RTN4IP1Q8WWV3 396 aaPredicted RBP6.32□□□□□ -1.4
MSI2-218ENST00000583821 ST6GALNAC6Q969X2 333 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 TMEM106AQ96A25 262 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 MRPL48Q96GC5 212 aaKnown RBP6.32□□□□□ -1.4
MSI2-218ENST00000583821 S1PR3Q99500 378 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 SLC29A1Q99808 456 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 MCRIP2Q9BUT9 160 aaKnown RBP6.32□□□□□ -1.4
MSI2-218ENST00000583821 ABCG5Q9H222 651 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 IFT22Q9H7X7 185 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 C8orf4Q9NR00 106 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 PLSCR3Q9NRY6 295 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 ZFP57Q9NU63 452 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 FAM118AQ9NWS6 357 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 GFOD1Q9NXC2 390 aa6.32□□□□□ -1.4
MSI2-218ENST00000583821 NKX1-2Q9UD57 310 aaPredicted RBP6.32□□□□□ -1.4
MSI2-218ENST00000583821 EPPK1P58107 5090 aaKnown RBP6.32□□□□□ -1.4
MSI2-218ENST00000583821 TRAV8-7A0A075B6U6 113 aa6.31□□□□□ -1.4
MSI2-218ENST00000583821 SEC14L6B5MCN3 397 aa6.31□□□□□ -1.4
MSI2-218ENST00000583821 AIPO00170 330 aa6.31□□□□□ -1.4
MSI2-218ENST00000583821 CASQ2O14958 399 aaPredicted RBP6.31□□□□□ -1.4
MSI2-218ENST00000583821 PAX4O43316 350 aa6.31□□□□□ -1.4
MSI2-218ENST00000583821 WBP4O75554 376 aaKnown RBP6.31□□□□□ -1.4
MSI2-218ENST00000583821 MT-ND4P03905 459 aa6.31□□□□□ -1.4
MSI2-218ENST00000583821 SLC2A2P11168 524 aaPredicted RBP6.31□□□□□ -1.4
MSI2-218ENST00000583821 CNTFRP26992 372 aa6.31□□□□□ -1.4
MSI2-218ENST00000583821 ZNF93P35789 620 aaPredicted RBP6.31□□□□□ -1.4
MSI2-218ENST00000583821 ECI1P42126 302 aa6.31□□□□□ -1.4
MSI2-218ENST00000583821 ZNF134P52741 427 aa6.31□□□□□ -1.4
MSI2-218ENST00000583821 RAB40BQ12829 278 aa6.31□□□□□ -1.4
MSI2-218ENST00000583821 MRPL28Q13084 256 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms