RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 CCR8P51685 355 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 AKR1C2P52895 323 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 OR10A3P58181 314 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 TAS2R39P59534 338 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 RPL19P84098 196 aaKnown RBP3.75□□□□□ -1.81
SS18-223ENST00000583595 FABP5Q01469 135 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 AKR1C1Q04828 323 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 RUNX3Q13761 415 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 KIAA0040Q15053 153 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 GUK1Q16774 197 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 TMEM241Q24JQ0 296 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 EOGTQ5NDL2 527 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 VAX1Q5SQQ9 334 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 COL5A1-AS1Q5SY13 56 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 HEPN1Q6WQI6 88 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 C12orf54Q6X4T0 127 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 ZNF620Q6ZNG0 422 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 LINC00336Q6ZUF6 198 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 SLC35D2Q76EJ3 337 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 PID1Q7Z2X4 250 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 GRINAQ7Z429 371 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 ZNF546Q86UE3 836 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 WDFY1Q8IWB7 410 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 SLC30A8Q8IWU4 369 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 OR2M7Q8NG81 312 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 OR11G2Q8NGC1 345 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 OR4K2Q8NGD2 314 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 OR51S1Q8NGJ8 323 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 OR51F2Q8NH61 342 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 NEIL3Q8TAT5 605 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 ORAOV1Q8WV07 137 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 RXFP2Q8WXD0 754 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 EEF1AKMT3Q96AZ1 226 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 PACRGQ96M98 296 aaPredicted RBP3.75□□□□□ -1.81
SS18-223ENST00000583595 TSSK6Q9BXA6 273 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 MAP1LC3CQ9BXW4 147 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 HES7Q9BYE0 225 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 RHOFQ9HBH0 211 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 HRASLSQ9HDD0 168 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 MARCH5Q9NX47 278 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 GSKIPQ9P0R6 139 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 DPM3Q9P2X0 92 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 ZNF282Q9UDV7 671 aaPredicted RBP3.75□□□□□ -1.81
SS18-223ENST00000583595 SLC7A11Q9UPY5 501 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 ANKRD31Q8N7Z5 1873 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 TSPAN11A1L157 253 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 SLC22A20A6NK97 555 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 E7EQ34 232 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 GABRPO00591 440 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 BHLHE40O14503 412 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 OR2J2O76002 312 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 NDUFB6O95139 128 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 WISP3O95389 354 aaPredicted RBP3.74□□□□□ -1.81
SS18-223ENST00000583595 CD8AP01732 235 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 CD74P04233 296 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 RPN2P04844 631 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 DCNP07585 359 aaKnown RBP3.74□□□□□ -1.81
SS18-223ENST00000583595 GZMBP10144 247 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 TPT1P13693 172 aaKnown RBP3.74□□□□□ -1.81
SS18-223ENST00000583595 FABP4P15090 132 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 HLA-GP17693 338 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 IL12BP29460 328 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 BRS3P32247 399 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 KDELR2P33947 212 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 RBM34P42696 430 aaKnown RBP3.74□□□□□ -1.81
SS18-223ENST00000583595 RPS10P46783 165 aaKnown RBP3.74□□□□□ -1.81
SS18-223ENST00000583595 TTPAP49638 278 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 SULT1A1P50225 295 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 CAV3P56539 151 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 CLDN12P56749 244 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 ZNF616Q08AN1 781 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 HERPUD1Q15011 391 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 PTGES3Q15185 160 aaKnown RBP3.74□□□□□ -1.81
SS18-223ENST00000583595 SHHQ15465 462 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 TGIF1Q15583 401 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 IQCJQ1A5X6 159 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 SLC25A30Q5SVS4 291 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 UTF1Q5T230 341 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 C1orf194Q5T5A4 169 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 HENMT1Q5T8I9 393 aaKnown RBP3.74□□□□□ -1.81
SS18-223ENST00000583595 ADNP2Q6IQ32 1131 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 METTL7BQ6UX53 244 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 RPS27LQ71UM5 84 aaKnown RBP3.74□□□□□ -1.81
SS18-223ENST00000583595 PRSS41Q7RTY9 318 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 ZNF547Q8IVP9 402 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 MSRB3Q8IXL7 192 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 C11orf42Q8N5U0 333 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 FAM24BQ8N5W8 94 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 ARIH2OSQ8N7S6 290 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 SLC30A7Q8NEW0 376 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 OR4F15Q8NGB8 312 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 HAVCR2Q8TDQ0 301 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 SMIM4Q8WVI0 70 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 FGF14Q92915 247 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 CPNE2Q96FN4 548 aaPredicted RBP3.74□□□□□ -1.81
SS18-223ENST00000583595 C18orf12Q96KH6 178 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 YPEL4Q96NS1 127 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 AIF1LQ9BQI0 150 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 SULT4A1Q9BR01 284 aa3.74□□□□□ -1.81
SS18-223ENST00000583595 VPS25Q9BRG1 176 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms