RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 C20orf204Q6ZNR8 217 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 LIAT1Q6ZQX7 453 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 TMUB2Q71RG4 321 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 TBC1D26Q86UD7 250 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 H1FOOQ8IZA3 346 aaPredicted RBP7.79□□□□□ -1.16
SS18-220ENST00000582092 ZNF561Q8N587 486 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 DEFB108BQ8NET1 73 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 OR11H4Q8NGC9 324 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 MRGPRDQ8TDS7 321 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 PPP1R1CQ8WVI7 109 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 ARL11Q969Q4 196 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 GALNT14Q96FL9 552 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 AKR1E2Q96JD6 320 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 SPIN2AQ99865 258 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 SPIN2BQ9BPZ2 258 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 CABLES2Q9BTV7 478 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 ARL6Q9H0F7 186 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 ZNF665Q9H7R5 613 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 SAP30LQ9HAJ7 183 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 GCM1Q9NP62 436 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 CCL28Q9NRJ3 127 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 CISD1Q9NZ45 108 aaKnown RBP7.79□□□□□ -1.16
SS18-220ENST00000582092 OR6C3Q9NZP0 311 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 AKAP6Q13023 2319 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 SPG11Q96JI7 2443 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.78□□□□□ -1.16
SS18-220ENST00000582092 DBX1A6NMT0 343 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 NPIPB11E5RHQ5 1161 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 PSPNO60542 156 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 ADAP1O75689 374 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 TUSC2O75896 110 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 OR2F2O95006 317 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 SCGB1D2O95969 90 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 HBZP02008 142 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 ADH4P08319 380 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 SLC25A4P12235 298 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 RPA2P15927 270 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 GLIPR1P48060 266 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 SUPT4H1P63272 117 aaKnown RBP7.78□□□□□ -1.16
SS18-220ENST00000582092 OR2F1Q13607 317 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 TMEM187Q14656 261 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 HMGN3Q15651 99 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 IAH1Q2TAA2 248 aaPredicted RBP7.78□□□□□ -1.16
SS18-220ENST00000582092 Q5BKY6 102 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 LY6G6FQ5SQ64 297 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 LAMTOR1Q6IAA8 161 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 TMEM65Q6PI78 240 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 FOXRED2Q8IWF2 684 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 GAPTQ8N292 157 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 GCSAMQ8N6F7 178 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 CD177Q8N6Q3 437 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 Q8TCH9 128 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 DCUN1D4Q92564 292 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 PLEKHF2Q9H8W4 249 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 OR2S2Q9NQN1 319 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 MBNL3Q9NUK0 354 aaKnown RBP7.78□□□□□ -1.16
SS18-220ENST00000582092 TMED3Q9Y3Q3 217 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 APCP25054 2843 aa7.78□□□□□ -1.16
SS18-220ENST00000582092 TEX15Q9BXT5 2789 aa7.77□□□□□ -1.16
SS18-220ENST00000582092 MYO9AB2RTY4 2548 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 MED13LQ71F56 2210 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 PPIAL4EA0A075B759 164 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 TRGV10A0A0A0MS01 117 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 SHISA9B4DS77 424 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 E7EQL1 145 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 PPIAL4DF5H284 164 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 ATG12O94817 140 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 MPC2O95563 127 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 CYB5R3P00387 301 aaPredicted RBP7.77□□□□□ -1.17
SS18-220ENST00000582092 LHBP01229 141 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 CD55P08174 381 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 OR8U9P0C7N5 309 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 PPIAL4FP0DN26 164 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 EGR1P18146 543 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 PVALBP20472 110 aaPredicted RBP7.77□□□□□ -1.17
SS18-220ENST00000582092 KRTAP10-9P60411 292 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 IFITM2Q01629 132 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 HERPUD1Q15011 391 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 ESCO2Q56NI9 601 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 TMEM268Q5VZI3 342 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 GGNBP1Q5YKI7 109 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 ZNF818PQ6ZRF7 136 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 ACOT7LQ6ZUV0 252 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 LURAP1LQ8IV03 231 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 ZBTB34Q8NCN2 500 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 OR8U1Q8NH10 309 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 OR1L1Q8NH94 360 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 EDARADDQ8WWZ3 215 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 CCL17Q92583 94 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 TMEM222Q9H0R3 208 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 LIME1Q9H400 295 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 PRR13Q9NZ81 148 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 OR1A1Q9P1Q5 309 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 GNG12Q9UBI6 72 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 UBQLN2Q9UHD9 624 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 PPIAL4AQ9Y536 164 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 MAB21L2Q9Y586 359 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 DSCAMO60469 2012 aa7.77□□□□□ -1.17
SS18-220ENST00000582092 ADGRG4Q8IZF6 3080 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 IGKV1D-17A0A075B6S4 117 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms