RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ZNF561Q8N587 486 aa11.18□□□□□ -0.62
CSNK1D-220ENST00000581737 HYLS1Q96M11 299 aa11.18□□□□□ -0.62
CSNK1D-220ENST00000581737 GAFA1Q96PS6 74 aa11.18□□□□□ -0.62
CSNK1D-220ENST00000581737 RANGRFQ9HD47 186 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-220ENST00000581737 MGAT4CQ9UBM8 478 aa11.18□□□□□ -0.62
CSNK1D-220ENST00000581737 CTSZQ9UBR2 303 aa11.18□□□□□ -0.62
CSNK1D-220ENST00000581737 OR14J1Q9UGF5 321 aa11.18□□□□□ -0.62
CSNK1D-220ENST00000581737 MEGF8Q7Z7M0 2845 aa11.18□□□□□ -0.62
CSNK1D-220ENST00000581737 MEIKINA0A087WXM9 373 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 PIGBOS1A0A0B4J2F0 54 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 F8VVB4 439 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 F8VWA3 439 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 DVL1O14640 695 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 DIRAS3O95661 229 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 HAND1O96004 215 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 TGFAP01135 160 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 GIPP09681 153 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 OR4E1P0C645 316 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 PGAM2P15259 253 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 RAP2BP61225 183 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 HERV-K104P61576 105 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 SEC61A1P61619 476 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 LCN2P80188 198 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 IL17RELQ6ZVW7 336 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 OVCH2Q7RTZ1 564 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 SLC25A42Q86VD7 318 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 C12orf45Q8N5I9 185 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 FAM216BQ8N7L0 139 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 PPP1R35Q8TAP8 253 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 TMEM186Q96B77 213 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 PHB2Q99623 299 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 BEX2Q9BXY8 128 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 FAM234AQ9H0X4 552 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 BEX1Q9HBH7 125 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 LPAR2Q9HBW0 351 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 CDC42EP3Q9UKI2 254 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 KCNS2Q9ULS6 477 aa11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 POLR3KQ9Y2Y1 108 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-220ENST00000581737 TRBV6-6A0A0A6YYG2 114 aa11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 ENSAO43768 121 aaKnown RBP11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 HLA-AP01891 365 aaKnown RBP11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 OR5H8P0DN80 308 aa11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 CD34P28906 385 aa11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 S100GP29377 79 aa11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 PAN3Q58A45 887 aaKnown RBP11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 TMEM128Q5BJH2 165 aa11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 ZNF841Q6ZN19 808 aa11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 LYG2Q86SG7 212 aa11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 CD177Q8N6Q3 437 aa11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 ASCC1Q8N9N2 400 aaKnown RBP11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 CCDC71LQ8N9Z2 235 aa11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 TMEM185AQ8NFB2 350 aa11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 OR13C8Q8NGS7 320 aa11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 COQ8AQ8NI60 647 aa11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 SEC22CQ9BRL7 303 aa11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 DPCDQ9BVM2 203 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 ZNF436Q9C0F3 470 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 SLC25A10Q9UBX3 287 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-220ENST00000581737 LOC105371242A0A075B767 164 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 J3QLI3 93 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 RGS11O94810 467 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 TK1P04183 234 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 COL10A1Q03692 680 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 DCAF12L2Q5VW00 463 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 BTNL3Q6UXE8 466 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 LHFPL1Q86WI0 220 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 TEX29Q8N6K0 151 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 SUMF2Q8NBJ7 301 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 OR2AK2Q8NG84 335 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 OR5D13Q8NGL4 314 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 DMRTB1Q96MA1 342 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 HIF1ANQ9NWT6 349 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 IL36RNQ9UBH0 155 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 SLC23A1Q9UHI7 598 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 MAB21L2Q9Y586 359 aa11.15□□□□□ -0.62
CSNK1D-220ENST00000581737 TRBV23-1A0A0A0MS06 115 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 IGHV2-70DA0A0C4DH43 119 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 K7N7A8 449 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 LIPFP07098 398 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 NDUFB7P17568 137 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 VAMP1P23763 118 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 ZFP36P26651 326 aaKnown RBP11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 DUSP1P28562 367 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 CEBPDP49716 269 aaPredicted RBP11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 ABCA11PQ4W5N1 156 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 TRAT1Q6PIZ9 186 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 FAM185AQ8N0U4 392 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 ZNRF1Q8ND25 227 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 MARCH1Q8TCQ1 289 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 H1FXQ92522 213 aaKnown RBP11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 ZNF486Q96H40 463 aaPredicted RBP11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 SNX22Q96L94 193 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 ZNF2Q9BSG1 426 aaPredicted RBP11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 RAB9BQ9NP90 201 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 ZNF230Q9UIE0 474 aaPredicted RBP11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 VSIG4Q9Y279 399 aa11.14□□□□□ -0.63
CSNK1D-220ENST00000581737 A0A0B4J2A0 478 aa11.13□□□□□ -0.63
CSNK1D-220ENST00000581737 A0A1B0GW55 424 aa11.13□□□□□ -0.63
CSNK1D-220ENST00000581737 FAM172BPA6NC97 362 aa11.13□□□□□ -0.63
CSNK1D-220ENST00000581737 TRDCB7Z8K6 153 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms