RNA–Protein interactions for RNA: ENST00000580642.2

SS18-215, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-215ENST00000580642 GPR132Q9UNW8 380 aa12.6□□□□□ -0.39
SS18-215ENST00000580642 LRBAP50851 2863 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 A0A087X0M5 115 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 TRAV39A0A0B4J263 110 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 PPIAL4CA0A0B4J2A2 164 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 A0A1B0GX30 115 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 C17orf98A8MV24 154 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 M0R1W7 72 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 IL5P05113 134 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 CTSDP07339 412 aaPredicted RBP12.59□□□□□ -0.39
SS18-215ENST00000580642 CEACAM6P40199 344 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 DLX6P56179 175 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 LOXL3P58215 753 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 FAM185AQ8N0U4 392 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 PRR18Q8N4B5 295 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 ZBTB34Q8NCN2 500 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 MRGPRFQ96AM1 343 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 AKR1E2Q96JD6 320 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 GFOD1Q9NXC2 390 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 RDH8Q9NYR8 311 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 GNG12Q9UBI6 72 aa12.59□□□□□ -0.39
SS18-215ENST00000580642 SPG11Q96JI7 2443 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 OR5H14A6NHG9 310 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 ENSAO43768 121 aaKnown RBP12.58□□□□□ -0.4
SS18-215ENST00000580642 PPIAL4GP0DN37 164 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 SPNP16150 400 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 AADACP22760 399 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 NFYAP23511 347 aaPredicted RBP12.58□□□□□ -0.4
SS18-215ENST00000580642 S100GP29377 79 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 RAB7AP51149 207 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 LUMP51884 338 aaPredicted RBP12.58□□□□□ -0.4
SS18-215ENST00000580642 AKAP6Q13023 2319 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 ZNF273Q14593 569 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 OR10V1Q8NGI7 309 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 TNFRSF14Q92956 283 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 C1orf159Q96HA4 380 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 RSRP1Q9BUV0 290 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 MMP28Q9H239 520 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 GAB2Q9UQC2 676 aa12.58□□□□□ -0.4
SS18-215ENST00000580642 C14orf166Q9Y224 244 aaKnown RBP12.58□□□□□ -0.4
SS18-215ENST00000580642 IGHV4-30-2A0A087WSY4 118 aa12.57□□□□□ -0.4
SS18-215ENST00000580642 KIAA1324LA8MWY0 1029 aaPredicted RBP12.57□□□□□ -0.4
SS18-215ENST00000580642 ARPC1BO15143 372 aaKnown RBP12.57□□□□□ -0.4
SS18-215ENST00000580642 USF1P22415 310 aaPredicted RBP12.57□□□□□ -0.4
SS18-215ENST00000580642 CD34P28906 385 aa12.57□□□□□ -0.4
SS18-215ENST00000580642 RND3P61587 244 aa12.57□□□□□ -0.4
SS18-215ENST00000580642 MORN2Q502X0 79 aa12.57□□□□□ -0.4
SS18-215ENST00000580642 SLC25A42Q86VD7 318 aa12.57□□□□□ -0.4
SS18-215ENST00000580642 CMTM1Q8IZ96 169 aa12.57□□□□□ -0.4
SS18-215ENST00000580642 FGFRL1Q8N441 504 aa12.57□□□□□ -0.4
SS18-215ENST00000580642 RFESDQ8TAC1 157 aa12.57□□□□□ -0.4
SS18-215ENST00000580642 MARCH1Q8TCQ1 289 aa12.57□□□□□ -0.4
SS18-215ENST00000580642 DACT3Q96B18 629 aaPredicted RBP12.57□□□□□ -0.4
SS18-215ENST00000580642 UNKLQ9H9P5 680 aaKnown RBP12.57□□□□□ -0.4
SS18-215ENST00000580642 GPN1Q9HCN4 374 aaPredicted RBP12.57□□□□□ -0.4
SS18-215ENST00000580642 OR1A1Q9P1Q5 309 aa12.57□□□□□ -0.4
SS18-215ENST00000580642 KPTNQ9Y664 436 aa12.57□□□□□ -0.4
SS18-215ENST00000580642 GCN1Q92616 2671 aaKnown RBP12.57□□□□□ -0.4
SS18-215ENST00000580642 FASNP49327 2511 aaKnown RBP12.57□□□□□ -0.4
SS18-215ENST00000580642 UTP20O75691 2785 aaKnown RBP12.56□□□□□ -0.4
SS18-215ENST00000580642 TRAV6A0A075B6T7 132 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 PIGBOS1A0A0B4J2F0 54 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 C7orf66A4D0T2 115 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 SNRPGP15A8MWD9 76 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 B3GALNT1O75752 331 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 RLN1P04808 185 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 PGAM2P15259 253 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 LOXL1Q08397 574 aaPredicted RBP12.56□□□□□ -0.4
SS18-215ENST00000580642 TMEM128Q5BJH2 165 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 METTL11BQ5VVY1 283 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 CCDC71LQ8N9Z2 235 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 OR2AK2Q8NG84 335 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 OR52L2PQ8NGH6 319 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 FOXC2Q99958 501 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 FXYD6Q9H0Q3 95 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 C5orf66Q9H5L9 145 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 VSIG4Q9Y279 399 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 SESN1Q9Y6P5 492 aa12.56□□□□□ -0.4
SS18-215ENST00000580642 IGHV4-61A0A0C4DH41 118 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 C22orf46C9J442 243 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 GPR31O00270 319 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 PHF1O43189 567 aaPredicted RBP12.55□□□□□ -0.4
SS18-215ENST00000580642 IGHV1-8P0DP01 117 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 ERVFRD-1P60508 538 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 DHODHQ02127 395 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 PAX2Q02962 417 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 TATDN3Q17R31 274 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 BTNL3Q6UXE8 466 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 KCTD9Q7L273 389 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 GLCCI1Q86VQ1 547 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 C11orf42Q8N5U0 333 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 LINC00311Q8N616 119 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.55□□□□□ -0.4
SS18-215ENST00000580642 BVESQ8NE79 360 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 ZNF596Q8TC21 504 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 RTBDNQ9BSG5 229 aaPredicted RBP12.55□□□□□ -0.4
SS18-215ENST00000580642 TMPRSS13Q9BYE2 586 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 SLC5A7Q9GZV3 580 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 NARFLQ9H6Q4 476 aa12.55□□□□□ -0.4
SS18-215ENST00000580642 METTL8Q9H825 291 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms