RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 ENTPD6O75354 484 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 RP2O75695 350 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 SULT1C4O75897 302 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 SLC22A5O76082 557 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 ATP6V1G2O95670 118 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 TYMSP04818 313 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 RBP1P09455 135 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 CT45A6P0DMU7 189 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 CT45A5P0DMU8 189 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 CT45A7P0DMV0 189 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 HLA-EP13747 358 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 TBPP20226 339 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 RPS3P23396 243 aaKnown RBP eCLIP3.24□□□□□ -1.89
NUP88-213ENST00000576862 F8A1P23610 371 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 FGF9P31371 208 aaPredicted RBP3.24□□□□□ -1.89
NUP88-213ENST00000576862 HRH1P35367 487 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 KIR2DS4P43632 304 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 RPS10P46783 165 aaKnown RBP3.24□□□□□ -1.89
NUP88-213ENST00000576862 RAB7AP51149 207 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 HCCSP53701 268 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 DLX6P56179 175 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 DNAJB13P59910 316 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 RAP1BP61224 184 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 STXBP1P61764 594 aaKnown RBP3.24□□□□□ -1.89
NUP88-213ENST00000576862 ST3GAL4Q11206 333 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 OR5I1Q13606 314 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 OR2F1Q13607 317 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 TMEM97Q5BJF2 176 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 CT45A1Q5HYN5 189 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 HIST2H3PS2Q5TEC6 136 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 WDR82Q6UXN9 313 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 RPS27LQ71UM5 84 aaKnown RBP3.24□□□□□ -1.89
NUP88-213ENST00000576862 FAM19A5Q7Z5A7 132 aaPredicted RBP3.24□□□□□ -1.89
NUP88-213ENST00000576862 VKORC1L1Q8N0U8 176 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 ZNF557Q8N988 423 aaPredicted RBP3.24□□□□□ -1.89
NUP88-213ENST00000576862 GPR26Q8NDV2 337 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 OR2M7Q8NG81 312 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 CT45A3Q8NHU0 189 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 PIFOQ8TCI5 191 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 SLC7A13Q8TCU3 470 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 CD200R1Q8TD46 325 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 GPR21Q99679 349 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 AGMATQ9BSE5 352 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 FAIM2Q9BWQ8 316 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 UGT2B28Q9BY64 529 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 PLA2G2FQ9BZM2 168 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 CCDC90BQ9GZT6 254 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 POMKQ9H5K3 350 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 REEP4Q9H6H4 257 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 POPDC3Q9HBV1 291 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 BIN3Q9NQY0 253 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 AGPAT4Q9NRZ5 378 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 VPS29Q9UBQ0 182 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 TP53TG1Q9Y2A0 90 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 KCNIP3Q9Y2W7 256 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 PRRC2BQ5JSZ5 2229 aaKnown RBP3.24□□□□□ -1.89
NUP88-213ENST00000576862 PDE4DIPQ5VU43 2346 aa3.24□□□□□ -1.89
NUP88-213ENST00000576862 MYO7AQ13402 2215 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 IGLV3-16A0A075B6K0 115 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 OR6C6A6NF89 314 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 CLDN24A6NM45 220 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 K7EP13 123 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 UBFD1O14562 309 aaKnown RBP3.23□□□□□ -1.89
NUP88-213ENST00000576862 TAAR5O14804 337 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 PFDN1O60925 122 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 LALBAP00709 142 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 IFNGP01579 166 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 CD8AP01732 235 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 SPINT3P49223 89 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 RANBP2P49792 3224 aaKnown RBP3.23□□□□□ -1.89
NUP88-213ENST00000576862 RORCP51449 518 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 HNRNPA3P51991 378 aaKnown RBP3.23□□□□□ -1.89
NUP88-213ENST00000576862 CLDN12P56749 244 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 TGFBR3Q03167 851 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 PDGFRLQ15198 375 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 GUSBP1Q15486 140 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 CLEC12BQ2HXU8 276 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 SLC25A35Q3KQZ1 300 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 C9orf64Q5T6V5 341 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 GPRC6AQ5T6X5 926 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 CYB5R2Q6BCY4 276 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 EPGNQ6UW88 154 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 OLIG3Q7RTU3 272 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 WDR31Q8NA23 367 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 GPR32P1Q8NGA4 272 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 OR4F15Q8NGB8 312 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 OR52E4Q8NGH9 312 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 Q8WTZ3 238 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 EEF1AKMT1Q8WVE0 214 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 FGF14Q92915 247 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 UCN3Q969E3 161 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 YIPF5Q969M3 257 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 RPUSD4Q96CM3 377 aaKnown RBP3.23□□□□□ -1.89
NUP88-213ENST00000576862 L3HYPDHQ96EM0 354 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 ADTRPQ96IZ2 230 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 OR52B2Q96RD2 323 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 PDCD1LG2Q9BQ51 273 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 TMEM208Q9BTX3 173 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 SLC19A3Q9BZV2 496 aa3.23□□□□□ -1.89
NUP88-213ENST00000576862 MIXL1Q9H2W2 232 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms