RNA–Protein interactions for RNA: ENST00000575100.1

VPS53-217, Transcript of VPS53, GARP complex subunit, humanhuman

Gene VPS53, Length 1,972 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-217ENST00000575100 TRMUO75648 421 aaKnown RBP5.69□□□□□ -1.5
VPS53-217ENST00000575100 ORM1P02763 201 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 FAM157CP0CG43 387 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 FAM106CPP0CH98 169 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 PGA4P0DJD7 388 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 PGA3P0DJD8 388 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 CTLA4P16410 223 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 SPI1P17947 270 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 NR4A1P22736 598 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 PYCR1P32322 319 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 LEPP41159 167 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 DAP3P51398 398 aaKnown RBP5.69□□□□□ -1.5
VPS53-217ENST00000575100 FUT6P51993 359 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 HCCSP53701 268 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 DGCR2P98153 550 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 RIGQ13278 110 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 APOFQ13790 326 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 GRK1Q15835 563 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 LINC01590Q5TEZ4 76 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 NXNL2Q5VZ03 156 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 DRAM2Q6UX65 266 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 SPNS3Q6ZMD2 512 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 RFLNBQ8N5W9 214 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 OR4F15Q8NGB8 312 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 STOML3Q8TAV4 291 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 DYNC2LI1Q8TCX1 351 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 OXGR1Q96P68 337 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 TMED9Q9BVK6 235 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 DUSP21Q9H596 190 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 BAIAP2Q9UQB8 552 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 ZNF835Q9Y2P0 537 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 FLVCR1Q9Y5Y0 555 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 HIVEP1P15822 2718 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 GTF3C1Q12789 2109 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 TRGV8A0A0C4DH27 118 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 FAM231BA6NCW3 169 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 SIGLEC5O15389 551 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 MPZL2O60487 215 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 ZNF432O94892 652 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 MPZL1O95297 269 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 OXTP01178 125 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 MRPL3P09001 348 aaKnown RBP5.69□□□□□ -1.5
VPS53-217ENST00000575100 H2AFB1P0C5Y9 115 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 MYOD1P15172 320 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 RPS27P42677 84 aaKnown RBP5.69□□□□□ -1.5
VPS53-217ENST00000575100 SRP9P49458 86 aaKnown RBP5.69□□□□□ -1.5
VPS53-217ENST00000575100 PRKXP51817 358 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 CDH11P55287 796 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 OR2B8PP59922 312 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 ZP1P60852 638 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 TIGITQ495A1 244 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 STX19Q8N4C7 294 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 OR1S2Q8NGQ3 325 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 OR11L1Q8NGX0 322 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 ZMYND19Q96E35 227 aaPredicted RBP5.69□□□□□ -1.5
VPS53-217ENST00000575100 C14orf144Q96I85 54 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 OR2M2Q96R28 347 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 TCEAL7Q9BRU2 100 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 RERGLQ9H628 205 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 CLN6Q9NWW5 311 aa5.69□□□□□ -1.5
VPS53-217ENST00000575100 CCDC59Q9P031 241 aaKnown RBP5.69□□□□□ -1.5
VPS53-217ENST00000575100 HCFC1P51610 2035 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 IGLV1-36A0A0B4J1U3 117 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 A0A1B0GV72 72 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 H0Y980 276 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 J3QRE1 110 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 SLC16A7O60669 478 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 CYB5R3P00387 301 aaPredicted RBP5.68□□□□□ -1.5
VPS53-217ENST00000575100 IFNA10P01566 189 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 IGHV3-9P01782 118 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 ZNF35P13682 527 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 DAOP14920 347 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 LMO1P25800 156 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 HTR1FP30939 366 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 MAP2K4P45985 399 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 CCR6P51684 374 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 SLC35B1P78383 322 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 ST3GAL4Q11206 333 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 C1DQ13901 141 aaKnown RBP5.68□□□□□ -1.5
VPS53-217ENST00000575100 HIST3H3Q16695 136 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 XAF1Q6GPH4 301 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 ZNF544Q6NX49 715 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 C16orf82Q7Z2V1 217 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 ABHD12Q8N2K0 398 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 STPG2Q8N412 459 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 NANOGP1Q8N7R0 232 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 OR1J1Q8NGS3 322 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 SLC25A44Q96H78 314 aaPredicted RBP5.68□□□□□ -1.5
VPS53-217ENST00000575100 ZNF649Q9BS31 505 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 ADGRL4Q9HBW9 690 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 ISYNA1Q9NPH2 558 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 CLCF1Q9UBD9 225 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 KLHL21Q9UJP4 597 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 FAM215AQ9Y5M1 114 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 AKAP9Q99996 3911 aa5.68□□□□□ -1.5
VPS53-217ENST00000575100 ADGRG4Q8IZF6 3080 aa5.67□□□□□ -1.5
VPS53-217ENST00000575100 IGKV3D-15A0A087WSY6 115 aa5.67□□□□□ -1.5
VPS53-217ENST00000575100 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
VPS53-217ENST00000575100 FAM25AB3EWG3 89 aa5.67□□□□□ -1.5
VPS53-217ENST00000575100 FAM25CB3EWG5 89 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms