RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ASXL3Q9C0F0 2248 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 FER1L5A0AVI2 2057 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 AQP7P3A6NL99 342 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 IL6RP08887 468 aaPredicted RBP12.31□□□□□ -0.44
SMG6-215ENST00000574501 PATE4P0C8F1 98 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 CD82P27701 267 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 SRP14P37108 136 aaKnown RBP12.31□□□□□ -0.44
SMG6-215ENST00000574501 ARL4DP49703 201 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 RPL15P61313 204 aaKnown RBP12.31□□□□□ -0.44
SMG6-215ENST00000574501 KCNIP4Q6PIL6 250 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 Q6ZWC4 215 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 ADPRHL1Q8NDY3 354 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 PIGCQ92535 297 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 RAB40CQ96S21 281 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 WDR61Q9GZS3 305 aaKnown RBP12.31□□□□□ -0.44
SMG6-215ENST00000574501 METTL7AQ9H8H3 244 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 GPR35Q9HC97 309 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 CACNG5Q9UF02 275 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 C1QTNF9BB2RNN3 333 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 MSX1P28360 303 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 SPANXN5Q5MJ07 72 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 OR10V1Q8NGI7 309 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 ASCL3Q9NQ33 180 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 TMEM106BQ9NUM4 274 aa12.31□□□□□ -0.44
SMG6-215ENST00000574501 IGKV1-6A0A0C4DH72 117 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 H0Y980 276 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 SYNGR2O43760 224 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 TNFSF13O75888 250 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 SERPINE2P07093 398 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 EGR1P18146 543 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 BMP5P22003 454 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 CDKN1AP38936 164 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 PLCXD3Q63HM9 321 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 ZDHHC23Q8IYP9 409 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 CMTM2Q8TAZ6 248 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 DNAJC4Q9NNZ3 241 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 TMEM250H0YL14 139 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 TRAPPC6AO75865 159 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 DEFA4P12838 97 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 FASLGP48023 281 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 OR8G2PQ6IF36 304 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 C11orf42Q8N5U0 333 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 VN1R17PQ8TDU5 208 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 NEK7Q8TDX7 302 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 LMX1AQ8TE12 382 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 TAF15Q92804 592 aaKnown RBP eCLIP12.3□□□□□ -0.44
SMG6-215ENST00000574501 PINX1Q96BK5 328 aaKnown RBP12.3□□□□□ -0.44
SMG6-215ENST00000574501 HS3ST6Q96QI5 342 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 PXMP4Q9Y6I8 212 aa12.3□□□□□ -0.44
SMG6-215ENST00000574501 TRBV11-1A0A0K0K1C0 115 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 DHHO43323 396 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 YPEL1O60688 119 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 GABRG2P18507 467 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 F2RP25116 425 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 ADMP35318 185 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 PTGDSP41222 190 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 TPTE2P1Q5T6R2 138 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 ACSM6Q6P461 480 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 ZNF611Q8N823 705 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 YPEL2Q96QA6 119 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 C20orf144Q9BQM9 153 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 PATZ1Q9HBE1 687 aaKnown RBP12.29□□□□□ -0.44
SMG6-215ENST00000574501 PAGE4O60829 102 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 UMODP07911 640 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 DRD1P21728 446 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 HBG1P69891 147 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 HBG2P69892 147 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 SLC25A53Q5H9E4 307 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 WDYHV1Q96HA8 205 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 UCN2Q96RP3 112 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 REPIN1Q9BWE0 567 aaKnown RBP12.29□□□□□ -0.44
SMG6-215ENST00000574501 IL36RNQ9UBH0 155 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 EXPH5Q8NEV8 1989 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 ZNF407Q9C0G0 2248 aa12.29□□□□□ -0.44
SMG6-215ENST00000574501 UNC13CQ8NB66 2214 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 PGPEP1LA6NFU8 196 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 NPPCP23582 126 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 RAB7AP51149 207 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 BLKP51451 505 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 PMP22Q01453 160 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 DEFB133Q30KQ1 61 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 TMEM240Q5SV17 173 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 C10orf128Q5T292 105 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 TEX43Q6ZNM6 134 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 HLA-CQ95604 372 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 FOXJ2Q9P0K8 574 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 FUT6P51993 359 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 PPP1CBP62140 327 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 RNPS1Q15287 305 aaKnown RBP12.28□□□□□ -0.44
SMG6-215ENST00000574501 TMEM183BQ1AE95 376 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 ACSF3Q4G176 576 aaPredicted RBP12.28□□□□□ -0.44
SMG6-215ENST00000574501 ZNF468Q5VIY5 522 aaPredicted RBP12.28□□□□□ -0.44
SMG6-215ENST00000574501 KLHDC7BQ96G42 594 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 HSPB9Q9BQS6 159 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 VAMP8Q9BV40 100 aa12.28□□□□□ -0.44
SMG6-215ENST00000574501 CD300LBA8K4G0 201 aa12.27□□□□□ -0.44
SMG6-215ENST00000574501 TUSC2O75896 110 aa12.27□□□□□ -0.44
SMG6-215ENST00000574501 IGKV1-39P01597 117 aa12.27□□□□□ -0.44
SMG6-215ENST00000574501 CRYAAP02489 173 aa12.27□□□□□ -0.44
SMG6-215ENST00000574501 IGKV1D-39P04432 117 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms