RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 SFXN3Q9BWM7 321 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 TMEM222Q9H0R3 208 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 OR1A1Q9P1Q5 309 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 PUS1Q9Y606 427 aaKnown RBP eCLIP8.84□□□□□ -0.99
USP43-205ENST00000574408 HSPA12AO43301 675 aa8.83□□□□□ -1
USP43-205ENST00000574408 DEDDO75618 318 aa8.83□□□□□ -1
USP43-205ENST00000574408 MBPP02686 304 aaPredicted RBP8.83□□□□□ -1
USP43-205ENST00000574408 MEOX2P50222 304 aa8.83□□□□□ -1
USP43-205ENST00000574408 MSMPQ1L6U9 139 aa8.83□□□□□ -1
USP43-205ENST00000574408 WDR82Q6UXN9 313 aa8.83□□□□□ -1
USP43-205ENST00000574408 CMTM1Q8IZ96 169 aa8.83□□□□□ -1
USP43-205ENST00000574408 CYTL1Q9NRR1 136 aa8.83□□□□□ -1
USP43-205ENST00000574408 TAAR3PQ9P1P4 343 aa8.83□□□□□ -1
USP43-205ENST00000574408 ERRFI1Q9UJM3 462 aaPredicted RBP8.83□□□□□ -1
USP43-205ENST00000574408 OR2W1Q9Y3N9 320 aa8.83□□□□□ -1
USP43-205ENST00000574408 K7EPK0 472 aa8.83□□□□□ -1
USP43-205ENST00000574408 NXPH3O95157 252 aa8.83□□□□□ -1
USP43-205ENST00000574408 CRYAAP02489 173 aa8.83□□□□□ -1
USP43-205ENST00000574408 TFF1P04155 84 aa8.83□□□□□ -1
USP43-205ENST00000574408 FABP1P07148 127 aa8.83□□□□□ -1
USP43-205ENST00000574408 OR13C7P0DN81 318 aa8.83□□□□□ -1
USP43-205ENST00000574408 HKR1P10072 659 aa8.83□□□□□ -1
USP43-205ENST00000574408 CEACAM8P31997 349 aaPredicted RBP8.83□□□□□ -1
USP43-205ENST00000574408 RND3P61587 244 aa8.83□□□□□ -1
USP43-205ENST00000574408 SRPXP78539 464 aa8.83□□□□□ -1
USP43-205ENST00000574408 ZNF324BQ6AW86 544 aaPredicted RBP8.83□□□□□ -1
USP43-205ENST00000574408 VHLLQ6RSH7 139 aa8.83□□□□□ -1
USP43-205ENST00000574408 LRP11Q86VZ4 500 aa8.83□□□□□ -1
USP43-205ENST00000574408 ZNF695Q8IW36 515 aa8.83□□□□□ -1
USP43-205ENST00000574408 H1FOOQ8IZA3 346 aaPredicted RBP8.83□□□□□ -1
USP43-205ENST00000574408 FAM71E2Q8N5Q1 922 aa8.83□□□□□ -1
USP43-205ENST00000574408 OR52M1Q8NGK5 317 aa8.83□□□□□ -1
USP43-205ENST00000574408 RXFP4Q8TDU9 374 aa8.83□□□□□ -1
USP43-205ENST00000574408 CABLES2Q9BTV7 478 aa8.83□□□□□ -1
USP43-205ENST00000574408 HES4Q9HCC6 221 aa8.83□□□□□ -1
USP43-205ENST00000574408 TREM2Q9NZC2 230 aa8.83□□□□□ -1
USP43-205ENST00000574408 SH3BGRL2Q9UJC5 107 aa8.83□□□□□ -1
USP43-205ENST00000574408 TMED3Q9Y3Q3 217 aa8.83□□□□□ -1
USP43-205ENST00000574408 ROS1P08922 2347 aa8.83□□□□□ -1
USP43-205ENST00000574408 IGF2RP11717 2491 aa8.83□□□□□ -1
USP43-205ENST00000574408 PSPNO60542 156 aa8.83□□□□□ -1
USP43-205ENST00000574408 RPL12P30050 165 aaKnown RBP8.83□□□□□ -1
USP43-205ENST00000574408 FAM27E3Q08E93 113 aa8.83□□□□□ -1
USP43-205ENST00000574408 BAP18Q8IXM2 172 aa8.83□□□□□ -1
USP43-205ENST00000574408 OR2Z1Q8NG97 314 aa8.83□□□□□ -1
USP43-205ENST00000574408 MED9Q9NWA0 146 aa8.83□□□□□ -1
USP43-205ENST00000574408 hCG_1809904A0A1W2PP81 198 aa8.82□□□□□ -1
USP43-205ENST00000574408 A0A1W2PR64 198 aa8.82□□□□□ -1
USP43-205ENST00000574408 A0A1W2PRV1 198 aa8.82□□□□□ -1
USP43-205ENST00000574408 PRRG2O14669 202 aa8.82□□□□□ -1
USP43-205ENST00000574408 RPS10P46783 165 aaKnown RBP8.82□□□□□ -1
USP43-205ENST00000574408 FABP9Q0Z7S8 132 aa8.82□□□□□ -1
USP43-205ENST00000574408 SFT2D1Q8WV19 159 aa8.82□□□□□ -1
USP43-205ENST00000574408 TAF9BQ9HBM6 251 aa8.82□□□□□ -1
USP43-205ENST00000574408 TMEM218A2RU14 115 aa8.82□□□□□ -1
USP43-205ENST00000574408 NKX2-6A6NCS4 301 aa8.82□□□□□ -1
USP43-205ENST00000574408 FGF2P09038 288 aa8.82□□□□□ -1
USP43-205ENST00000574408 ACAA1P09110 424 aaPredicted RBP8.82□□□□□ -1
USP43-205ENST00000574408 OMGP23515 440 aa8.82□□□□□ -1
USP43-205ENST00000574408 TBR1Q16650 682 aa8.82□□□□□ -1
USP43-205ENST00000574408 ACP7Q6ZNF0 438 aa8.82□□□□□ -1
USP43-205ENST00000574408 C1orf174Q8IYL3 243 aa8.82□□□□□ -1
USP43-205ENST00000574408 Q8NA96 180 aa8.82□□□□□ -1
USP43-205ENST00000574408 ESRP2Q9H6T0 727 aaKnown RBP8.82□□□□□ -1
USP43-205ENST00000574408 FBXO7Q9Y3I1 522 aa8.82□□□□□ -1
USP43-205ENST00000574408 RBM7Q9Y580 266 aaKnown RBP8.82□□□□□ -1
USP43-205ENST00000574408 S100GP29377 79 aa8.82□□□□□ -1
USP43-205ENST00000574408 C4orf17Q53FE4 359 aa8.82□□□□□ -1
USP43-205ENST00000574408 DOLPP1Q86YN1 238 aa8.82□□□□□ -1
USP43-205ENST00000574408 FAM24BQ8N5W8 94 aa8.82□□□□□ -1
USP43-205ENST00000574408 OR10V1Q8NGI7 309 aa8.82□□□□□ -1
USP43-205ENST00000574408 OR51H1Q8NH63 302 aa8.82□□□□□ -1
USP43-205ENST00000574408 LRRC29Q8WV35 223 aa8.82□□□□□ -1
USP43-205ENST00000574408 MIOXQ9UGB7 285 aa8.82□□□□□ -1
USP43-205ENST00000574408 SSUH2Q9Y2M2 353 aa8.82□□□□□ -1
USP43-205ENST00000574408 ATMQ13315 3056 aa8.82□□□□□ -1
USP43-205ENST00000574408 POLEQ07864 2286 aa8.81□□□□□ -1
USP43-205ENST00000574408 A8MXK9 166 aa8.81□□□□□ -1
USP43-205ENST00000574408 PGLYRP1O75594 196 aaPredicted RBP8.81□□□□□ -1
USP43-205ENST00000574408 PTBP3O95758 552 aaKnown RBP8.81□□□□□ -1
USP43-205ENST00000574408 TDGF1P3P51864 188 aa8.81□□□□□ -1
USP43-205ENST00000574408 CLEC12BQ2HXU8 276 aa8.81□□□□□ -1
USP43-205ENST00000574408 RPL7L1Q6DKI1 246 aaKnown RBP8.81□□□□□ -1
USP43-205ENST00000574408 GFRALQ6UXV0 394 aa8.81□□□□□ -1
USP43-205ENST00000574408 SELENOHQ8IZQ5 122 aaKnown RBP8.81□□□□□ -1
USP43-205ENST00000574408 HSD17B11Q8NBQ5 300 aa8.81□□□□□ -1
USP43-205ENST00000574408 MARVELD3Q96A59 401 aa8.81□□□□□ -1
USP43-205ENST00000574408 TMEM56Q96MV1 263 aa8.81□□□□□ -1
USP43-205ENST00000574408 MMP24Q9Y5R2 645 aa8.81□□□□□ -1
USP43-205ENST00000574408 TMEM56-RWDD3S4R434 201 aa8.81□□□□□ -1
USP43-205ENST00000574408 TMEM30CPA0ZSE6 113 aa8.81□□□□□ -1
USP43-205ENST00000574408 A8MXE2 369 aa8.81□□□□□ -1
USP43-205ENST00000574408 E5RGE8 158 aa8.81□□□□□ -1
USP43-205ENST00000574408 ST8SIA3O43173 380 aa8.81□□□□□ -1
USP43-205ENST00000574408 NDUFS6O75380 124 aaKnown RBP8.81□□□□□ -1
USP43-205ENST00000574408 EIF3GO75821 320 aaKnown RBP eCLIP8.81□□□□□ -1
USP43-205ENST00000574408 SNAPINO95295 136 aa8.81□□□□□ -1
USP43-205ENST00000574408 AESQ08117 197 aa8.81□□□□□ -1
USP43-205ENST00000574408 SMIM21Q3B7S5 101 aa8.81□□□□□ -1
USP43-205ENST00000574408 LILRB2Q8N423 598 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms