RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 POM121L2Q96KW2 1035 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 PLK3Q9H4B4 646 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 DOCK7Q96N67 2140 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 SEC14L6B5MCN3 397 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 IGKV1-5P01602 117 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 COX5BP10606 129 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 LHX2P50458 406 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 FAM58AQ8N1B3 248 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 MAFAQ8NHW3 353 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-206ENST00000573852 CA5BP1Q8WTZ4 195 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 MBD3L1Q8WWY6 194 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 FRZBQ92765 325 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 CABLES2Q9BTV7 478 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 PSENENQ9NZ42 101 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 PPP1R3CQ9UQK1 317 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 ZNF729A6NN14 1252 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-206ENST00000573852 RHBDL1O75783 438 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 LINC00596Q86U02 117 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 HIST3H2BBQ8N257 126 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 OR13D1Q8NGV5 346 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 TREM2Q9NZC2 230 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 OR14J1Q9UGF5 321 aa16.19■□□□□ 0.18
SCARF1-206ENST00000573852 FRYQ5TBA9 3013 aa16.18■□□□□ 0.18
SCARF1-206ENST00000573852 TRGC1P0CF51 173 aa16.18■□□□□ 0.18
SCARF1-206ENST00000573852 OR2T2Q6IF00 324 aa16.18■□□□□ 0.18
SCARF1-206ENST00000573852 RCC1LQ96I51 464 aaKnown RBP16.18■□□□□ 0.18
SCARF1-206ENST00000573852 OR51B6Q9H340 312 aa16.18■□□□□ 0.18
SCARF1-206ENST00000573852 LRFN1Q9P244 771 aa16.18■□□□□ 0.18
SCARF1-206ENST00000573852 CLDN18P56856 261 aa16.18■□□□□ 0.18
SCARF1-206ENST00000573852 NKX6-1P78426 367 aaPredicted RBP16.18■□□□□ 0.18
SCARF1-206ENST00000573852 TESK1Q15569 626 aa16.18■□□□□ 0.18
SCARF1-206ENST00000573852 PRR18Q8N4B5 295 aa16.18■□□□□ 0.18
SCARF1-206ENST00000573852 LSM10Q969L4 123 aaKnown RBP16.18■□□□□ 0.18
SCARF1-206ENST00000573852 SSX3Q99909 188 aa16.18■□□□□ 0.18
SCARF1-206ENST00000573852 PPP1R2P9O14990 202 aa16.17■□□□□ 0.18
SCARF1-206ENST00000573852 SERPINA7P05543 415 aa16.17■□□□□ 0.18
SCARF1-206ENST00000573852 RND2P52198 227 aa16.17■□□□□ 0.18
SCARF1-206ENST00000573852 TCEAL6Q6IPX3 200 aa16.17■□□□□ 0.18
SCARF1-206ENST00000573852 TIPARPQ7Z3E1 657 aaKnown RBP16.17■□□□□ 0.18
SCARF1-206ENST00000573852 UBALD1Q8TB05 177 aa16.17■□□□□ 0.18
SCARF1-206ENST00000573852 CT55Q8WUE5 264 aa16.17■□□□□ 0.18
SCARF1-206ENST00000573852 PFDN5Q99471 154 aa16.17■□□□□ 0.18
SCARF1-206ENST00000573852 SDF2L1Q9HCN8 221 aa16.17■□□□□ 0.18
SCARF1-206ENST00000573852 BOKQ9UMX3 212 aaPredicted RBP16.17■□□□□ 0.18
SCARF1-206ENST00000573852 CYB5R3P00387 301 aaPredicted RBP16.17■□□□□ 0.18
SCARF1-206ENST00000573852 PLA2G5P39877 138 aa16.17■□□□□ 0.18
SCARF1-206ENST00000573852 ZNF585BQ52M93 769 aa16.17■□□□□ 0.18
SCARF1-206ENST00000573852 ZNF573Q86YE8 665 aa16.17■□□□□ 0.18
SCARF1-206ENST00000573852 C1orf87Q8N0U7 546 aa16.17■□□□□ 0.18
SCARF1-206ENST00000573852 PSMG3Q9BT73 122 aaPredicted RBP16.17■□□□□ 0.18
SCARF1-206ENST00000573852 HES7Q9BYE0 225 aa16.17■□□□□ 0.18
SCARF1-206ENST00000573852 ANKRD30BLA7E2S9 258 aa16.16■□□□□ 0.18
SCARF1-206ENST00000573852 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-206ENST00000573852 CLDN34H7C241 214 aa16.16■□□□□ 0.18
SCARF1-206ENST00000573852 MDH2P40926 338 aaKnown RBP16.16■□□□□ 0.18
SCARF1-206ENST00000573852 WNT5AP41221 380 aa16.16■□□□□ 0.18
SCARF1-206ENST00000573852 DUSP3P51452 185 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-206ENST00000573852 GNG3P63215 75 aa16.16■□□□□ 0.18
SCARF1-206ENST00000573852 PNRC1Q12796 327 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-206ENST00000573852 LRRC75BQ2VPJ9 315 aa16.16■□□□□ 0.18
SCARF1-206ENST00000573852 C4orf17Q53FE4 359 aa16.16■□□□□ 0.18
SCARF1-206ENST00000573852 MYPOPQ86VE0 399 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-206ENST00000573852 OR1K1Q8NGR3 316 aa16.16■□□□□ 0.18
SCARF1-206ENST00000573852 TMEM242Q9NWH2 141 aa16.16■□□□□ 0.18
SCARF1-206ENST00000573852 DEGS1O15121 323 aa16.16■□□□□ 0.18
SCARF1-206ENST00000573852 GATCO43716 136 aaKnown RBP16.16■□□□□ 0.18
SCARF1-206ENST00000573852 WNT2P09544 360 aa16.16■□□□□ 0.18
SCARF1-206ENST00000573852 ZNF16P17020 682 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-206ENST00000573852 Q6P435 159 aa16.16■□□□□ 0.18
SCARF1-206ENST00000573852 OR2M7Q8NG81 312 aa16.16■□□□□ 0.18
SCARF1-206ENST00000573852 ZNF703Q9H7S9 590 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-206ENST00000573852 R4GN57 208 aa16.16■□□□□ 0.18
SCARF1-206ENST00000573852 MED12LQ86YW9 2145 aa16.16■□□□□ 0.18
SCARF1-206ENST00000573852 CA6P23280 308 aa16.15■□□□□ 0.18
SCARF1-206ENST00000573852 FAM180AQ6UWF9 173 aa16.15■□□□□ 0.18
SCARF1-206ENST00000573852 DNAJC13O75165 2243 aa16.15■□□□□ 0.18
SCARF1-206ENST00000573852 CEBPZOSA8MTT3 80 aa16.15■□□□□ 0.18
SCARF1-206ENST00000573852 PHOX2AO14813 284 aa16.15■□□□□ 0.18
SCARF1-206ENST00000573852 ARR3P36575 388 aa16.15■□□□□ 0.18
SCARF1-206ENST00000573852 SSPNQ14714 243 aa16.15■□□□□ 0.18
SCARF1-206ENST00000573852 BEND4Q6ZU67 534 aa16.15■□□□□ 0.18
SCARF1-206ENST00000573852 LILRB2Q8N423 598 aa16.15■□□□□ 0.18
SCARF1-206ENST00000573852 OR4C12Q96R67 309 aa16.15■□□□□ 0.18
SCARF1-206ENST00000573852 PRDM13Q9H4Q3 707 aa16.15■□□□□ 0.18
SCARF1-206ENST00000573852 ELOA3CA0A087WX78 387 aaPredicted RBP16.14■□□□□ 0.17
SCARF1-206ENST00000573852 NEURL1O76050 574 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 SPANXN5Q5MJ07 72 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 DCAF12Q5T6F0 453 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 THOC3Q96J01 351 aaKnown RBP16.14■□□□□ 0.17
SCARF1-206ENST00000573852 OR51I2Q9H344 312 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 RNF150Q9ULK6 438 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 MPC1Q9Y5U8 109 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 DIDO1Q9BTC0 2240 aaKnown RBP16.14■□□□□ 0.17
SCARF1-206ENST00000573852 PIGBOS1A0A0B4J2F0 54 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 A0A1W2PR80 420 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 OR5B21A6NL26 309 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 FAM166BA8MTA8 275 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 NPIPB11E5RHQ5 1161 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 SYNGR4O95473 234 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 MDKP21741 143 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms