RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 BRS3P32247 399 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 DHODHQ02127 395 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 ZNF529Q6P280 563 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 SEZ6L2Q6UXD5 910 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 LYG2Q86SG7 212 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 C9orf62Q8N4C0 152 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 MS4A7Q9GZW8 240 aaPredicted RBP8.58□□□□□ -1.04
SMG6-213ENST00000573166 INSIG2Q9Y5U4 225 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 PQLC2LA1A4F0 135 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 IGHV1-46P01743 117 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 SLC6A1P30531 599 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 ERVFRD-1P60508 538 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 RAB11AP62491 216 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 UBA52P62987 128 aaKnown RBP8.58□□□□□ -1.04
SMG6-213ENST00000573166 NCMAPQ5T1S8 102 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 GPR157Q5UAW9 335 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 SP5Q6BEB4 398 aaPredicted RBP8.58□□□□□ -1.04
SMG6-213ENST00000573166 HOGA1Q86XE5 327 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 FAM216BQ8N7L0 139 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 ZDHHC22Q8N966 263 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 POC1AQ8NBT0 407 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 NEUROG1Q92886 237 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 PFDN5Q99471 154 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 LOC105371242A0A075B767 164 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 GSTZ1O43708 216 aaPredicted RBP8.57□□□□□ -1.04
SMG6-213ENST00000573166 CFDP00746 253 aaPredicted RBP8.57□□□□□ -1.04
SMG6-213ENST00000573166 OTX1P32242 354 aaPredicted RBP8.57□□□□□ -1.04
SMG6-213ENST00000573166 HIST1H3AP68431 136 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 ZNF260Q3ZCT1 412 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 HIST2H3PS2Q5TEC6 136 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 HIST2H3AQ71DI3 136 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 BIN3Q9NQY0 253 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 CRYBA1P05813 215 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 KITLGP21583 273 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 S100A11P31949 105 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 TMEM255AQ5JRV8 349 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 SVBPQ8N300 66 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 TMEM217Q8N7C4 229 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 OR51I2Q9H344 312 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 RHOFQ9HBH0 211 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 CCL28Q9NRJ3 127 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 SLC35D1Q9NTN3 355 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 HSF4Q9ULV5 492 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 OR2W1Q9Y3N9 320 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 FAM157AC9JC47 383 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 CHATP28329 748 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 LPAR6P43657 344 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 PDLIM3Q53GG5 364 aaPredicted RBP8.57□□□□□ -1.04
SMG6-213ENST00000573166 FAM74A1Q5RGS3 127 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 ZNF626Q68DY1 528 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 ZNF561Q8N587 486 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 FAM169BQ8N8A8 192 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 DUSP18Q8NEJ0 188 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 ZNF649Q9BS31 505 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 SIRT7Q9NRC8 400 aa8.57□□□□□ -1.04
SMG6-213ENST00000573166 DOPEY2Q9Y3R5 2298 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 F2RL2O00254 374 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 SMAD7O15105 426 aaKnown RBP8.56□□□□□ -1.04
SMG6-213ENST00000573166 AGPAT2O15120 278 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 SSX5O60225 188 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 SNAPINO95295 136 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 SCTP09683 121 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 FOSL1P15407 271 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 TMEM33P57088 247 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 HBG1P69891 147 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 HBG2P69892 147 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 HGFACQ04756 655 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 IGSF11Q5DX21 431 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 MBNL2Q5VZF2 373 aaKnown RBP8.56□□□□□ -1.04
SMG6-213ENST00000573166 OR8G2PQ6IF36 304 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 ZNF485Q8NCK3 441 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 OR52L2PQ8NGH6 319 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 ADTRPQ96IZ2 230 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 CALYQ9NYX4 217 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 MALRD1Q5VYJ5 2156 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 FOXH1O75593 365 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 THBDP07204 575 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 IGFBP3P17936 291 aaPredicted RBP8.56□□□□□ -1.04
SMG6-213ENST00000573166 REG1BP48304 166 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 UNC119Q13432 240 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 LAMTOR1Q6IAA8 161 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 FAM122CQ6P4D5 195 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 SLC51BQ86UW2 128 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 OR1L1Q8NH94 360 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 ZNF596Q8TC21 504 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 NUDT16L1Q9BRJ7 211 aaKnown RBP8.56□□□□□ -1.04
SMG6-213ENST00000573166 IL36GQ9NZH8 169 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 IL36RNQ9UBH0 155 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 ELF5Q9UKW6 265 aaPredicted RBP8.56□□□□□ -1.04
SMG6-213ENST00000573166 PLAUP00749 431 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 PSG2P11465 335 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 HNF1AP20823 631 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 SUB1P53999 127 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMG6-213ENST00000573166 ADIPOQQ15848 244 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 AKR1C8PQ5T2L2 129 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 WDR82Q6UXN9 313 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 WDFY1Q8IWB7 410 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 ST8SIA2Q92186 375 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 MAGT1Q9H0U3 335 aa8.56□□□□□ -1.04
SMG6-213ENST00000573166 SSUH2Q9Y2M2 353 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms