RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 FMO3P31513 532 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 RPL4P36578 427 aaKnown RBP4.25□□□□□ -1.73
SF3B3-214ENST00000572365 GPX4P36969 197 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-214ENST00000572365 EVX1P49640 407 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 ERVS71-1P61550 626 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 GNB2P62879 340 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 TGFBR3Q03167 851 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 PRB3Q04118 309 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-214ENST00000572365 C2orf80Q0P641 193 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 LCP2Q13094 533 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 PDE7AQ13946 482 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 PEA15Q15121 130 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 MPPED2Q15777 294 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 ZNF79Q15937 498 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 LGALSLQ3ZCW2 172 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-214ENST00000572365 OR2B11Q5JQS5 317 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 SPANXN4Q5MJ08 99 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 HIST2H3PS2Q5TEC6 136 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 LIPJQ5W064 366 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 TBPL2Q6SJ96 375 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 PAQR6Q6TCH4 344 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 ZNF620Q6ZNG0 422 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 Q6ZRP5 223 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 TMPPEQ6ZT21 453 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 AAED1Q7RTV5 226 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 MDP1Q86V88 176 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 LRRC28Q86X40 367 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-214ENST00000572365 FTMTQ8N4E7 242 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 ZIC4Q8N9L1 334 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 NUP37Q8NFH4 326 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 PROKR2Q8NFJ6 384 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 TERB2Q8NHR7 220 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 STOML3Q8TAV4 291 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 CNIH3Q8TBE1 160 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 MAFIPQ8WZ33 124 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 ALKBH3Q96Q83 286 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-214ENST00000572365 SEC11CQ9BY50 192 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 TOLLIPQ9H0E2 274 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 OR51E2Q9H255 320 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 GLIPR2Q9H4G4 154 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 ZNF442Q9H7R0 627 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 METTL8Q9H825 291 aaKnown RBP4.25□□□□□ -1.73
SF3B3-214ENST00000572365 MTHFD2LQ9H903 347 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-214ENST00000572365 POPDC3Q9HBV1 291 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 EXOSC4Q9NPD3 245 aaKnown RBP4.25□□□□□ -1.73
SF3B3-214ENST00000572365 AHSPQ9NZD4 102 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 CARHSP1Q9Y2V2 147 aaKnown RBP4.25□□□□□ -1.73
SF3B3-214ENST00000572365 RPL36Q9Y3U8 105 aaKnown RBP4.25□□□□□ -1.73
SF3B3-214ENST00000572365 INSIG2Q9Y5U4 225 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 KCNE3Q9Y6H6 103 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 STARD9Q9P2P6 4700 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 HECTD4Q9Y4D8 3996 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 IGKV3D-15A0A087WSY6 115 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 IGHV1-69-2A0A0G2JMI3 117 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 hCG_38984A0A1B0GV85 526 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 GNG14A0A1W2PPG7 69 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 C9orf170A2RU37 121 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 FXYD1O00168 92 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 CXCR6O00574 342 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 PLA2G10O15496 165 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 SYT7O43581 403 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 GADD45GO95257 159 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 IGKV3-20P01619 116 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 HLA-HP01893 362 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 FABP3P05413 133 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 GLAP06280 429 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 NMBP08949 121 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 METTL15P1P0C7V9 234 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 CD79AP11912 226 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 CCL2P13500 99 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 MGMTP16455 207 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 PPIBP23284 216 aaKnown RBP4.24□□□□□ -1.73
SF3B3-214ENST00000572365 FGF9P31371 208 aaPredicted RBP4.24□□□□□ -1.73
SF3B3-214ENST00000572365 MPIP34949 423 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 P2RX1P51575 399 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 HCCSP53701 268 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 MRPS10P82664 201 aaKnown RBP4.24□□□□□ -1.73
SF3B3-214ENST00000572365 ST3GAL4Q11206 333 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 IL18Q14116 193 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 FCN2Q15485 313 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 SPHARQ15513 63 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 TRAM1Q15629 374 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 ETFRF1Q6IPR1 90 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 GSG1LQ6UXU4 331 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 IL34Q6ZMJ4 242 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 RNF165Q6ZSG1 346 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 HIST2H3AQ71DI3 136 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 SSX8Q7RTT4 187 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 SMIM15Q7Z3B0 74 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 CMC1Q7Z7K0 106 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 CATSPERDQ86XM0 798 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 ZDHHC21Q8IVQ6 265 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 KDM8Q8N371 416 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 ZNF283Q8N7M2 679 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 OR13C5Q8NGS8 318 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 OR2T35Q8NGX2 323 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 RHEBL1Q8TAI7 183 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 C16orf78Q8WTQ4 265 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 MALSU1Q96EH3 234 aa4.24□□□□□ -1.73
SF3B3-214ENST00000572365 SOSTQ9BQB4 213 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms