RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 FAM46BQ96A09 425 aa13.65□□□□□ -0.22
LITAF-211ENST00000572255 TAF9BQ9HBM6 251 aa13.65□□□□□ -0.22
LITAF-211ENST00000572255 PLSCR3Q9NRY6 295 aa13.65□□□□□ -0.22
LITAF-211ENST00000572255 PDCD6O75340 191 aa13.64□□□□□ -0.23
LITAF-211ENST00000572255 SLC6A1P30531 599 aa13.64□□□□□ -0.23
LITAF-211ENST00000572255 KRTAP10-11P60412 298 aa13.64□□□□□ -0.23
LITAF-211ENST00000572255 GPR50Q13585 617 aa13.64□□□□□ -0.23
LITAF-211ENST00000572255 INSL4Q14641 139 aa13.64□□□□□ -0.23
LITAF-211ENST00000572255 RBMXL1Q96E39 390 aaKnown RBP13.64□□□□□ -0.23
LITAF-211ENST00000572255 S1PR3Q99500 378 aa13.64□□□□□ -0.23
LITAF-211ENST00000572255 CST11Q9H112 138 aa13.64□□□□□ -0.23
LITAF-211ENST00000572255 MBNL3Q9NUK0 354 aaKnown RBP13.64□□□□□ -0.23
LITAF-211ENST00000572255 GHRLQ9UBU3 117 aa13.64□□□□□ -0.23
LITAF-211ENST00000572255 LANCL1O43813 399 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 CDK1P06493 297 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 HOXD3P31249 432 aaPredicted RBP13.63□□□□□ -0.23
LITAF-211ENST00000572255 MYCNOSP40205 109 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 GP2P55259 537 aaKnown RBP13.63□□□□□ -0.23
LITAF-211ENST00000572255 GABPB1Q06547 395 aaPredicted RBP13.63□□□□□ -0.23
LITAF-211ENST00000572255 GNMTQ14749 295 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 ACSM3Q53FZ2 586 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 FAM27D1Q5T7N8 215 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 STEAP3Q658P3 488 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 TEX38Q6PEX7 206 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 UNQ9370/PRO34162Q6UXP9 181 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 ZNF695Q8IW36 515 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 OR8H1Q8NGG4 311 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 MRPL30Q8TCC3 161 aaKnown RBP13.63□□□□□ -0.23
LITAF-211ENST00000572255 RASL11BQ9BPW5 248 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 MND1Q9BWT6 205 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 GPR61Q9BZJ8 451 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 VCXQ9H320 206 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 OR2S2Q9NQN1 319 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 KCNIP1Q9NZI2 227 aa13.63□□□□□ -0.23
LITAF-211ENST00000572255 WI2-2373I1.2A0A1W2PRP0 233 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 UBBP0CG47 229 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 F2RL1P55085 397 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 EGFEM1PQ0D2K5 195 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 PNLIPRP3Q17RR3 467 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 MORN2Q502X0 79 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 NKAPLQ5M9Q1 402 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 RNLSQ5VYX0 342 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 C5orf24Q7Z6I8 188 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 ZNF554Q86TJ5 538 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 LRRTM1Q86UE6 522 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 FAM71E2Q8N5Q1 922 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 MS4A15Q8N5U1 240 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 OR52L2PQ8NGH6 319 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 DPF1Q92782 380 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 P2RX4Q99571 388 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 TMED9Q9BVK6 235 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 GON7Q9BXV9 100 aa13.62□□□□□ -0.23
LITAF-211ENST00000572255 H0YHG0 523 aa13.61□□□□□ -0.23
LITAF-211ENST00000572255 RPLP1P05386 114 aaKnown RBP13.61□□□□□ -0.23
LITAF-211ENST00000572255 CHATP28329 748 aa13.61□□□□□ -0.23
LITAF-211ENST00000572255 PPP1CCP36873 323 aaKnown RBP13.61□□□□□ -0.23
LITAF-211ENST00000572255 LSAMPQ13449 338 aa13.61□□□□□ -0.23
LITAF-211ENST00000572255 C1orf100Q5SVJ3 147 aa13.61□□□□□ -0.23
LITAF-211ENST00000572255 C6orf141Q5SZD1 244 aa13.61□□□□□ -0.23
LITAF-211ENST00000572255 OR10K2Q6IF99 312 aa13.61□□□□□ -0.23
LITAF-211ENST00000572255 LCNL1Q6ZST4 164 aa13.61□□□□□ -0.23
LITAF-211ENST00000572255 PHYHIPQ92561 330 aa13.61□□□□□ -0.23
LITAF-211ENST00000572255 NEDD4LQ96PU5 975 aa13.61□□□□□ -0.23
LITAF-211ENST00000572255 HSPB9Q9BQS6 159 aa13.61□□□□□ -0.23
LITAF-211ENST00000572255 SULT4A1Q9BR01 284 aa13.61□□□□□ -0.23
LITAF-211ENST00000572255 ABHD14AQ9BUJ0 271 aa13.61□□□□□ -0.23
LITAF-211ENST00000572255 MCRIP2Q9BUT9 160 aaKnown RBP13.61□□□□□ -0.23
LITAF-211ENST00000572255 JPT1Q9UK76 154 aa13.61□□□□□ -0.23
LITAF-211ENST00000572255 ANKRD65E5RJM6 399 aa13.6□□□□□ -0.23
LITAF-211ENST00000572255 PTGES3LE9PB15 166 aa13.6□□□□□ -0.23
LITAF-211ENST00000572255 RRP9O43818 475 aaKnown RBP13.6□□□□□ -0.23
LITAF-211ENST00000572255 VSIG8P0DPA2 414 aa13.6□□□□□ -0.23
LITAF-211ENST00000572255 SOX6P35712 828 aa13.6□□□□□ -0.23
LITAF-211ENST00000572255 RPS27AP62979 156 aaKnown RBP13.6□□□□□ -0.23
LITAF-211ENST00000572255 HTD2P86397 168 aa13.6□□□□□ -0.23
LITAF-211ENST00000572255 FOXE3Q13461 319 aa13.6□□□□□ -0.23
LITAF-211ENST00000572255 CXorf66Q5JRM2 361 aaPredicted RBP13.6□□□□□ -0.23
LITAF-211ENST00000572255 RBM48Q5RL73 367 aaKnown RBP13.6□□□□□ -0.23
LITAF-211ENST00000572255 GLT8D1Q68CQ7 371 aa13.6□□□□□ -0.23
LITAF-211ENST00000572255 RAX2Q96IS3 184 aa13.6□□□□□ -0.23
LITAF-211ENST00000572255 DUX3Q96PT4 197 aa13.6□□□□□ -0.23
LITAF-211ENST00000572255 LSM2Q9Y333 95 aaKnown RBP13.6□□□□□ -0.23
LITAF-211ENST00000572255 YPEL1O60688 119 aa13.59□□□□□ -0.23
LITAF-211ENST00000572255 CFHR3Q02985 330 aa13.59□□□□□ -0.23
LITAF-211ENST00000572255 SPHARQ15513 63 aa13.59□□□□□ -0.23
LITAF-211ENST00000572255 DEFB121Q5J5C9 76 aa13.59□□□□□ -0.23
LITAF-211ENST00000572255 CEACAM19Q7Z692 300 aa13.59□□□□□ -0.23
LITAF-211ENST00000572255 ODF3L1Q8IXM7 274 aa13.59□□□□□ -0.23
LITAF-211ENST00000572255 RNF152Q8N8N0 203 aa13.59□□□□□ -0.23
LITAF-211ENST00000572255 YPEL2Q96QA6 119 aa13.59□□□□□ -0.23
LITAF-211ENST00000572255 FAAP24Q9BTP7 215 aa13.59□□□□□ -0.23
LITAF-211ENST00000572255 TMEM59Q9BXS4 323 aa13.59□□□□□ -0.23
LITAF-211ENST00000572255 DCLRE1BQ9H816 532 aa13.59□□□□□ -0.23
LITAF-211ENST00000572255 CCL24O00175 119 aa13.58□□□□□ -0.24
LITAF-211ENST00000572255 RGS11O94810 467 aa13.58□□□□□ -0.24
LITAF-211ENST00000572255 ELANEP08246 267 aa13.58□□□□□ -0.24
LITAF-211ENST00000572255 SRMP19623 302 aa13.58□□□□□ -0.24
LITAF-211ENST00000572255 VDAC1P21796 283 aa13.58□□□□□ -0.24
LITAF-211ENST00000572255 MYF6P23409 242 aa13.58□□□□□ -0.24
LITAF-211ENST00000572255 HTR2CP28335 458 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms