RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 SPHARQ15513 63 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 KRBOX4Q5JUW0 171 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 OR2G6Q5TZ20 316 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 ACSM6Q6P461 480 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 AHSA2Q719I0 299 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 PRSS48Q7RTY5 328 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 GTSCR1Q86UQ5 136 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 NKAIN3Q8N8D7 197 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 ZNF491Q8N8L2 437 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 ZNF565Q8N9K5 539 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 OR51T1Q8NGJ9 327 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 OR13C9Q8NGT0 318 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 EAF1Q96JC9 268 aaPredicted RBP8.57□□□□□ -1.04
VPS53-207ENST00000570510 UQCC2Q9BRT2 126 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 EXOSC4Q9NPD3 245 aaKnown RBP8.57□□□□□ -1.04
VPS53-207ENST00000570510 OR6C3Q9NZP0 311 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 IL36RNQ9UBH0 155 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 GHRLQ9UBU3 117 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 HERC2O95714 4834 aa8.57□□□□□ -1.04
VPS53-207ENST00000570510 A0A087X0M5 115 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 TRBV5-7A0A0A0MS05 114 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 A0A1B0GX30 115 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 C12orf77C9JDV5 145 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 ATP6V1G2O95670 118 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 ZNF44P15621 663 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 IGFBP3P17936 291 aaPredicted RBP8.56□□□□□ -1.04
VPS53-207ENST00000570510 C21orf33P30042 268 aaPredicted RBP8.56□□□□□ -1.04
VPS53-207ENST00000570510 BDKRB2P30411 391 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 GTF2A1P52655 376 aaPredicted RBP8.56□□□□□ -1.04
VPS53-207ENST00000570510 DIAPH2-AS1Q14236 149 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 IRF3Q14653 427 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 LTC4SQ16873 150 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 ASPHD1Q5U4P2 390 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 FAM53AQ6NSI3 398 aaPredicted RBP8.56□□□□□ -1.04
VPS53-207ENST00000570510 Q8N1Y9 231 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 OR10AC1Q8NH08 325 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 LEAP2Q969E1 77 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 FAM110AQ9BQ89 295 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 CHCHD6Q9BRQ6 235 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 KLK15Q9H2R5 256 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 RBFOX1Q9NWB1 397 aaKnown RBP8.56□□□□□ -1.04
VPS53-207ENST00000570510 CLEC2DQ9UHP7 191 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 STUB1Q9UNE7 303 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 GSTK1Q9Y2Q3 226 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 MRPS28Q9Y2Q9 187 aaKnown RBP8.56□□□□□ -1.04
VPS53-207ENST00000570510 FRAS1Q86XX4 4008 aa8.56□□□□□ -1.04
VPS53-207ENST00000570510 DSCAML1Q8TD84 2053 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 KBTBD11-OT1A0A1B0GTJ5 212 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 MAGEA13PA6NCF6 341 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 FAM90A10PA6NDY2 464 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 CXorf65A6NEN9 183 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 FAM90A7PA6NKC0 464 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 FAM90A23PA8MXZ1 464 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 HSD17B6O14756 317 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 DENRO43583 198 aaKnown RBP8.55□□□□□ -1.04
VPS53-207ENST00000570510 RGS10O43665 173 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 OR2H2O95918 312 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 GLAP06280 429 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 TMEM225BP0DP42 221 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 CELP19835 753 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 GALP22466 123 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 CRHBPP24387 322 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 GLP1RP43220 463 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 REG1BP48304 166 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 GABARAPL2P60520 117 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 RPS11P62280 158 aaKnown RBP eCLIP8.55□□□□□ -1.04
VPS53-207ENST00000570510 CFHR3Q02985 330 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 TPBGQ13641 420 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 IZUMO2Q6UXV1 221 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 Q8N9W7 124 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 OR51A2Q8NGJ7 313 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 RGP1Q92546 391 aaPredicted RBP8.55□□□□□ -1.04
VPS53-207ENST00000570510 KIRREL1Q96J84 757 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 S1PR3Q99500 378 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 S100A13Q99584 98 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 ST6GALNAC5Q9BVH7 336 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 SPACA1Q9HBV2 294 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 RETNQ9HD89 108 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 PSG11Q9UQ72 335 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 WSB1Q9Y6I7 421 aa8.55□□□□□ -1.04
VPS53-207ENST00000570510 IGHV1-3A0A0C4DH29 117 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 PTGES3LE9PB15 166 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 SC5DO75845 299 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 MOSP00540 346 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 UBBP0CG47 229 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 CD37P11049 281 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 BCL3P20749 454 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 ZNF93P35789 620 aaPredicted RBP8.54□□□□□ -1.04
VPS53-207ENST00000570510 NPBWR2P48146 333 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 RAB9AP51151 201 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 PSMD7P51665 324 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 TBCEQ15813 527 aaPredicted RBP8.54□□□□□ -1.04
VPS53-207ENST00000570510 MPV17LQ2QL34 196 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 XAF1Q6GPH4 301 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 HAPLN4Q86UW8 402 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 OR8H1Q8NGG4 311 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 FLYWCH2Q96CP2 140 aaKnown RBP8.54□□□□□ -1.04
VPS53-207ENST00000570510 DERL3Q96Q80 235 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 GPER1Q99527 375 aa8.54□□□□□ -1.04
VPS53-207ENST00000570510 ZNF184Q99676 751 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms