RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 ATG101Q9BSB4 218 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 KCNJ16Q9NPI9 418 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 OR14J1Q9UGF5 321 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 ANAPC10Q9UM13 185 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 TMEM56-RWDD3S4R434 201 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 RALGAPA1Q6GYQ0 2036 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 PGA4P0DJD7 388 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 PGA3P0DJD8 388 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 CHATP28329 748 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 PPIFP30405 207 aaKnown RBP6.87□□□□□ -1.31
TCF4-246ENST00000570287 ZNF260Q3ZCT1 412 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 SP5Q6BEB4 398 aaPredicted RBP6.87□□□□□ -1.31
TCF4-246ENST00000570287 OR8G2PQ6IF36 304 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 S100A7AQ86SG5 101 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 OR51F2Q8NH61 342 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 TERB2Q8NHR7 220 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 FAM222BQ8WU58 562 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 OXGR1Q96P68 337 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 MOB1AQ9H8S9 216 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 FOXA2Q9Y261 457 aaPredicted RBP6.87□□□□□ -1.31
TCF4-246ENST00000570287 VCANP13611 3396 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 TNRC18O15417 2968 aaPredicted RBP6.87□□□□□ -1.31
TCF4-246ENST00000570287 LOC102725191A0A1B0GVB3 256 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 SMCO3A2RU48 225 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 SERPINE3A8MV23 424 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 TRAF3IP2O43734 574 aaPredicted RBP6.87□□□□□ -1.31
TCF4-246ENST00000570287 RAMP1O60894 148 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 SFT2D2O95562 160 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 TTRP02766 147 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 TRGC1P0CF51 173 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 MEOX1P50221 254 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 IDH3GP51553 393 aaPredicted RBP6.87□□□□□ -1.31
TCF4-246ENST00000570287 SUPT4H1P63272 117 aaKnown RBP6.87□□□□□ -1.31
TCF4-246ENST00000570287 GGNBP1Q5YKI7 109 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 SLC25A47Q6Q0C1 308 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 BTNL3Q6UXE8 466 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 ZNF627Q7L945 461 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 ZNF101Q8IZC7 436 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 CASTOR1Q8WTX7 329 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 OR10C1Q96KK4 312 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 C2orf50Q96LR7 162 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 PBDC1Q9BVG4 233 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 PBOV1Q9GZY1 135 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 ZNF430Q9H8G1 570 aaPredicted RBP6.87□□□□□ -1.31
TCF4-246ENST00000570287 MMP24Q9Y5R2 645 aa6.87□□□□□ -1.31
TCF4-246ENST00000570287 CHCHD2Q9Y6H1 151 aaPredicted RBP6.87□□□□□ -1.31
TCF4-246ENST00000570287 LOC101059948A0A1B0GTJ6 334 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 A1L4Q6 167 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 TMEM235A6NFC5 223 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 PRYO14603 147 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 GCGP01275 180 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 TRGC2P03986 189 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 CEACAM8P31997 349 aaPredicted RBP6.86□□□□□ -1.31
TCF4-246ENST00000570287 OTX2P32243 289 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 COA6Q5JTJ3 125 aaKnown RBP6.86□□□□□ -1.31
TCF4-246ENST00000570287 OR2T2Q6IF00 324 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 TMEM183AQ8IXX5 376 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 LFNGQ8NES3 379 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 GJC3Q8NFK1 279 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 FGGYQ96C11 551 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 GINS3Q9BRX5 216 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 GEMIN7Q9H840 131 aaKnown RBP6.86□□□□□ -1.31
TCF4-246ENST00000570287 PITPNC1Q9UKF7 332 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 RAB22AQ9UL26 194 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 RNF115Q9Y4L5 304 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 ZNF878C9JN71 531 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 M0R296 226 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 LMX1BO60663 402 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 TDGF1P13385 188 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 AKR1C4P17516 323 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 DUSP3P51452 185 aaPredicted RBP6.86□□□□□ -1.31
TCF4-246ENST00000570287 SLC35A1P78382 337 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 EXT1Q16394 746 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 HIST3H3Q16695 136 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 ANKRD55Q3KP44 614 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 CLEC18BQ6UXF7 455 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 FRZBQ92765 325 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 TECTBQ96PL2 329 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 CDX2Q99626 313 aaPredicted RBP6.86□□□□□ -1.31
TCF4-246ENST00000570287 NKX3-1Q99801 234 aaPredicted RBP6.86□□□□□ -1.31
TCF4-246ENST00000570287 EIF5A2Q9GZV4 153 aaKnown RBP6.86□□□□□ -1.31
TCF4-246ENST00000570287 C5orf66Q9H5L9 145 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 IL17BQ9UHF5 180 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 LHFPL6Q9Y693 200 aa6.86□□□□□ -1.31
TCF4-246ENST00000570287 YLPM1P49750 1951 aaKnown RBP6.86□□□□□ -1.31
TCF4-246ENST00000570287 IGHV1-45A0A0A0MS14 117 aa6.85□□□□□ -1.31
TCF4-246ENST00000570287 C9orf172C9J069 976 aa6.85□□□□□ -1.31
TCF4-246ENST00000570287 HSD17B6O14756 317 aa6.85□□□□□ -1.31
TCF4-246ENST00000570287 OR5AC1P0C628 307 aa6.85□□□□□ -1.31
TCF4-246ENST00000570287 ZNF708P17019 499 aa6.85□□□□□ -1.31
TCF4-246ENST00000570287 ZNF43P17038 809 aa6.85□□□□□ -1.31
TCF4-246ENST00000570287 OR3A1P47881 315 aa6.85□□□□□ -1.31
TCF4-246ENST00000570287 GLIPR1P48060 266 aa6.85□□□□□ -1.31
TCF4-246ENST00000570287 AKR1C8PQ5T2L2 129 aa6.85□□□□□ -1.31
TCF4-246ENST00000570287 PRAMEF5Q5TYX0 476 aa6.85□□□□□ -1.31
TCF4-246ENST00000570287 PRAMEF6Q5VXH4 476 aa6.85□□□□□ -1.31
TCF4-246ENST00000570287 SLC22A24Q8N4F4 322 aa6.85□□□□□ -1.31
TCF4-246ENST00000570287 OR8G5Q8NG78 346 aa6.85□□□□□ -1.31
TCF4-246ENST00000570287 OR4D6Q8NGJ1 314 aa6.85□□□□□ -1.31
TCF4-246ENST00000570287 OR5D14Q8NGL3 314 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms