RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 OR52I2Q8NH67 350 aa8.83□□□□□ -1
CDH3-208ENST00000569036 OR1S1Q8NH92 325 aa8.83□□□□□ -1
CDH3-208ENST00000569036 GPR148Q8TDV2 347 aa8.83□□□□□ -1
CDH3-208ENST00000569036 SLC25A38Q96DW6 304 aa8.83□□□□□ -1
CDH3-208ENST00000569036 MALSU1Q96EH3 234 aa8.83□□□□□ -1
CDH3-208ENST00000569036 PELI1Q96FA3 418 aa8.83□□□□□ -1
CDH3-208ENST00000569036 GAFA1Q96PS6 74 aa8.83□□□□□ -1
CDH3-208ENST00000569036 GPX7Q96SL4 187 aaPredicted RBP8.83□□□□□ -1
CDH3-208ENST00000569036 ARL6Q9H0F7 186 aa8.83□□□□□ -1
CDH3-208ENST00000569036 SCPEP1Q9HB40 452 aa8.83□□□□□ -1
CDH3-208ENST00000569036 RASL12Q9NYN1 266 aa8.83□□□□□ -1
CDH3-208ENST00000569036 MBD2Q9UBB5 411 aa8.83□□□□□ -1
CDH3-208ENST00000569036 MTFP1Q9UDX5 166 aa8.83□□□□□ -1
CDH3-208ENST00000569036 ZNF391Q9UJN7 358 aa8.83□□□□□ -1
CDH3-208ENST00000569036 TBL2Q9Y4P3 447 aaKnown RBP8.83□□□□□ -1
CDH3-208ENST00000569036 TRBV2A0A0J9YWF9 115 aa8.82□□□□□ -1
CDH3-208ENST00000569036 PQLC2LA1A4F0 135 aa8.82□□□□□ -1
CDH3-208ENST00000569036 FAM90A22PA8MWA6 464 aa8.82□□□□□ -1
CDH3-208ENST00000569036 E9PI62 339 aa8.82□□□□□ -1
CDH3-208ENST00000569036 RBBP9O75884 186 aa8.82□□□□□ -1
CDH3-208ENST00000569036 AKAIN1P0CW23 69 aa8.82□□□□□ -1
CDH3-208ENST00000569036 CBX5P45973 191 aa8.82□□□□□ -1
CDH3-208ENST00000569036 SLC25A1P53007 311 aa8.82□□□□□ -1
CDH3-208ENST00000569036 OR12D2P58182 307 aa8.82□□□□□ -1
CDH3-208ENST00000569036 TAS2R20P59543 309 aa8.82□□□□□ -1
CDH3-208ENST00000569036 MADCAM1Q13477 382 aa8.82□□□□□ -1
CDH3-208ENST00000569036 Q499Y3 187 aa8.82□□□□□ -1
CDH3-208ENST00000569036 KIAA2026Q5HYC2 2103 aa8.82□□□□□ -1
CDH3-208ENST00000569036 FAM27D1Q5T7N8 215 aa8.82□□□□□ -1
CDH3-208ENST00000569036 OTPQ5XKR4 325 aa8.82□□□□□ -1
CDH3-208ENST00000569036 DPY19L2P2Q6ZN68 376 aa8.82□□□□□ -1
CDH3-208ENST00000569036 CFAP77Q6ZQR2 320 aa8.82□□□□□ -1
CDH3-208ENST00000569036 ZNF788Q6ZQV5 615 aa8.82□□□□□ -1
CDH3-208ENST00000569036 MOB3CQ70IA8 216 aa8.82□□□□□ -1
CDH3-208ENST00000569036 C16orf82Q7Z2V1 217 aa8.82□□□□□ -1
CDH3-208ENST00000569036 FAM220AQ7Z4H9 259 aa8.82□□□□□ -1
CDH3-208ENST00000569036 C11orf53Q8IXP5 236 aa8.82□□□□□ -1
CDH3-208ENST00000569036 DERL3Q96Q80 235 aa8.82□□□□□ -1
CDH3-208ENST00000569036 SEC22CQ9BRL7 303 aa8.82□□□□□ -1
CDH3-208ENST00000569036 TXNIPQ9H3M7 391 aa8.82□□□□□ -1
CDH3-208ENST00000569036 AUNIPQ9H7T9 357 aa8.82□□□□□ -1
CDH3-208ENST00000569036 PLA2G2EQ9NZK7 142 aa8.82□□□□□ -1
CDH3-208ENST00000569036 MRPS7Q9Y2R9 242 aaKnown RBP8.82□□□□□ -1
CDH3-208ENST00000569036 FAT2Q9NYQ8 4349 aa8.81□□□□□ -1
CDH3-208ENST00000569036 TRBV5-5A0A0J9YX44 114 aa8.81□□□□□ -1
CDH3-208ENST00000569036 FAM183AA6NL82 134 aa8.81□□□□□ -1
CDH3-208ENST00000569036 ODF3BA8MYP8 253 aa8.81□□□□□ -1
CDH3-208ENST00000569036 FAM25EA8MYX2 175 aa8.81□□□□□ -1
CDH3-208ENST00000569036 H7C2Y5 167 aa8.81□□□□□ -1
CDH3-208ENST00000569036 DEDDO75618 318 aa8.81□□□□□ -1
CDH3-208ENST00000569036 IFNA6P05013 189 aa8.81□□□□□ -1
CDH3-208ENST00000569036 IFNA4P05014 189 aa8.81□□□□□ -1
CDH3-208ENST00000569036 ARG1P05089 322 aa8.81□□□□□ -1
CDH3-208ENST00000569036 PGA5P0DJD9 388 aa8.81□□□□□ -1
CDH3-208ENST00000569036 HLA-GP17693 338 aa8.81□□□□□ -1
CDH3-208ENST00000569036 MPZP25189 248 aa8.81□□□□□ -1
CDH3-208ENST00000569036 NOS3P29474 1203 aa8.81□□□□□ -1
CDH3-208ENST00000569036 OR3A4PP47883 348 aa8.81□□□□□ -1
CDH3-208ENST00000569036 CENPAP49450 140 aa8.81□□□□□ -1
CDH3-208ENST00000569036 ZNF660Q6AZW8 331 aaPredicted RBP8.81□□□□□ -1
CDH3-208ENST00000569036 SVBPQ8N300 66 aa8.81□□□□□ -1
CDH3-208ENST00000569036 KCNRGQ8N5I3 272 aa8.81□□□□□ -1
CDH3-208ENST00000569036 BEST4Q8NFU0 473 aa8.81□□□□□ -1
CDH3-208ENST00000569036 OR8U1Q8NH10 309 aa8.81□□□□□ -1
CDH3-208ENST00000569036 NMNAT2Q9BZQ4 307 aa8.81□□□□□ -1
CDH3-208ENST00000569036 IFT22Q9H7X7 185 aa8.81□□□□□ -1
CDH3-208ENST00000569036 MEPEQ9NQ76 525 aaPredicted RBP8.81□□□□□ -1
CDH3-208ENST00000569036 C19orf12Q9NSK7 152 aa8.81□□□□□ -1
CDH3-208ENST00000569036 VSX1Q9NZR4 365 aaPredicted RBP8.81□□□□□ -1
CDH3-208ENST00000569036 HSPG2P98160 4391 aa8.81□□□□□ -1
CDH3-208ENST00000569036 DNAH11Q96DT5 4516 aa8.81□□□□□ -1
CDH3-208ENST00000569036 ANXA2P2A6NMY6 339 aa8.8□□□□□ -1
CDH3-208ENST00000569036 CD300LBA8K4G0 201 aa8.8□□□□□ -1
CDH3-208ENST00000569036 DNASE2O00115 360 aaPredicted RBP8.8□□□□□ -1
CDH3-208ENST00000569036 RER1O15258 196 aa8.8□□□□□ -1
CDH3-208ENST00000569036 SIGLEC5O15389 551 aa8.8□□□□□ -1
CDH3-208ENST00000569036 BCL2L11O43521 198 aa8.8□□□□□ -1
CDH3-208ENST00000569036 AMY1AP04745 511 aa8.8□□□□□ -1
CDH3-208ENST00000569036 AMY2AP04746 511 aa8.8□□□□□ -1
CDH3-208ENST00000569036 IGHV4-30-4P0DP06 118 aa8.8□□□□□ -1
CDH3-208ENST00000569036 INSL3P51460 131 aa8.8□□□□□ -1
CDH3-208ENST00000569036 RPL27P61353 136 aaKnown RBP8.8□□□□□ -1
CDH3-208ENST00000569036 WDR82Q6UXN9 313 aa8.8□□□□□ -1
CDH3-208ENST00000569036 WDR86Q86TI4 376 aa8.8□□□□□ -1
CDH3-208ENST00000569036 SPAG16Q8N0X2 631 aa8.8□□□□□ -1
CDH3-208ENST00000569036 COQ8AQ8NI60 647 aa8.8□□□□□ -1
CDH3-208ENST00000569036 TNFAIP8L1Q8WVP5 186 aa8.8□□□□□ -1
CDH3-208ENST00000569036 ST8SIA2Q92186 375 aa8.8□□□□□ -1
CDH3-208ENST00000569036 MRPS24Q96EL2 167 aaKnown RBP8.8□□□□□ -1
CDH3-208ENST00000569036 AKR1E2Q96JD6 320 aa8.8□□□□□ -1
CDH3-208ENST00000569036 CXorf58Q96LI9 332 aa8.8□□□□□ -1
CDH3-208ENST00000569036 OR14A2Q96R54 314 aa8.8□□□□□ -1
CDH3-208ENST00000569036 TBX5Q99593 518 aa8.8□□□□□ -1
CDH3-208ENST00000569036 NKX6-2Q9C056 277 aaPredicted RBP8.8□□□□□ -1
CDH3-208ENST00000569036 MFFQ9GZY8 342 aa8.8□□□□□ -1
CDH3-208ENST00000569036 OR51V1Q9H2C8 321 aa8.8□□□□□ -1
CDH3-208ENST00000569036 MRPL15Q9P015 296 aaKnown RBP8.8□□□□□ -1
CDH3-208ENST00000569036 STEAP1Q9UHE8 339 aa8.8□□□□□ -1
CDH3-208ENST00000569036 COPS3Q9UNS2 423 aa8.8□□□□□ -1
CDH3-208ENST00000569036 TMEM14AQ9Y6G1 99 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms