RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 IGLV1-40P01703 118 aa11.44□□□□□ -0.58
USB1-214ENST00000568848 LIMS3P0CW19 117 aa11.44□□□□□ -0.58
USB1-214ENST00000568848 LIMS4P0CW20 117 aa11.44□□□□□ -0.58
USB1-214ENST00000568848 SERPINA2P20848 420 aa11.44□□□□□ -0.58
USB1-214ENST00000568848 RAB9AP51151 201 aa11.44□□□□□ -0.58
USB1-214ENST00000568848 GTF2A1P52655 376 aaPredicted RBP11.44□□□□□ -0.58
USB1-214ENST00000568848 ADARB1P78563 741 aaKnown RBP11.44□□□□□ -0.58
USB1-214ENST00000568848 LSAMPQ13449 338 aa11.44□□□□□ -0.58
USB1-214ENST00000568848 DOC2BQ14184 412 aa11.44□□□□□ -0.58
USB1-214ENST00000568848 RCN1Q15293 331 aa11.44□□□□□ -0.58
USB1-214ENST00000568848 ZNF429Q86V71 674 aa11.44□□□□□ -0.58
USB1-214ENST00000568848 LINC00311Q8N616 119 aa11.44□□□□□ -0.58
USB1-214ENST00000568848 NEK7Q8TDX7 302 aa11.44□□□□□ -0.58
USB1-214ENST00000568848 FAM110AQ9BQ89 295 aa11.44□□□□□ -0.58
USB1-214ENST00000568848 MRPL20Q9BYC9 149 aaKnown RBP11.44□□□□□ -0.58
USB1-214ENST00000568848 ANKRD60Q9BZ19 345 aa11.44□□□□□ -0.58
USB1-214ENST00000568848 TRAV41A0A0B4J266 112 aa11.43□□□□□ -0.58
USB1-214ENST00000568848 ETV1P50549 477 aa11.43□□□□□ -0.58
USB1-214ENST00000568848 GBX2P52951 348 aaPredicted RBP11.43□□□□□ -0.58
USB1-214ENST00000568848 RBM11P57052 281 aaKnown RBP11.43□□□□□ -0.58
USB1-214ENST00000568848 XAF1Q6GPH4 301 aa11.43□□□□□ -0.58
USB1-214ENST00000568848 SLC25A48Q6ZT89 311 aaKnown RBP11.43□□□□□ -0.58
USB1-214ENST00000568848 PXT1Q8NFP0 134 aa11.43□□□□□ -0.58
USB1-214ENST00000568848 OR10A7Q8NGE5 316 aa11.43□□□□□ -0.58
USB1-214ENST00000568848 OR5AK2Q8NH90 309 aa11.43□□□□□ -0.58
USB1-214ENST00000568848 ISOC1Q96CN7 298 aa11.43□□□□□ -0.58
USB1-214ENST00000568848 RDH12Q96NR8 316 aa11.43□□□□□ -0.58
USB1-214ENST00000568848 OR51J1Q9H342 316 aa11.43□□□□□ -0.58
USB1-214ENST00000568848 NCOR1P1Q9H4R4 102 aa11.43□□□□□ -0.58
USB1-214ENST00000568848 RHOFQ9HBH0 211 aa11.43□□□□□ -0.58
USB1-214ENST00000568848 FGF20Q9NP95 211 aaPredicted RBP11.43□□□□□ -0.58
USB1-214ENST00000568848 TPSG1Q9NRR2 321 aa11.43□□□□□ -0.58
USB1-214ENST00000568848 GNG12Q9UBI6 72 aa11.43□□□□□ -0.58
USB1-214ENST00000568848 DHDHQ9UQ10 334 aa11.43□□□□□ -0.58
USB1-214ENST00000568848 A0A1W2PN81 502 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 LINC01619G3V211 115 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 AIPO00170 330 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 MT-ND4P03905 459 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 RCC1P18754 421 aaPredicted RBP11.42□□□□□ -0.58
USB1-214ENST00000568848 CHRNA7P36544 502 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 OR3A3P47888 321 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 INSL3P51460 131 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 ACTBP60709 375 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 RUNX1Q01196 453 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 DEFA5Q01523 94 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 OR2G6Q5TZ20 316 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 SLC16A12Q6ZSM3 486 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 SERPINA12Q8IW75 414 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 PARP16Q8N5Y8 322 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 OR52L2PQ8NGH6 319 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 OR13C5Q8NGS8 318 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 MS4A10Q96PG2 267 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 FAM103A1Q9BTL3 118 aaKnown RBP11.42□□□□□ -0.58
USB1-214ENST00000568848 RSRP1Q9BUV0 290 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 TOLLIPQ9H0E2 274 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 GAB2Q9UQC2 676 aa11.42□□□□□ -0.58
USB1-214ENST00000568848 FAM90A10PA6NDY2 464 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 TMEM212A6NML5 194 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 HBZP02008 142 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 RAB3AP20336 220 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 IL3RAP26951 378 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 TTC23Q5W5X9 447 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 ZNF529Q6P280 563 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 ACSM6Q6P461 480 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 ZNF497Q6ZNH5 498 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 ODF3L1Q8IXM7 274 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 DHRSXQ8N5I4 330 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 OR5D14Q8NGL3 314 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 OR52N1Q8NH53 320 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 MYCBPQ99417 103 aaPredicted RBP11.41□□□□□ -0.58
USB1-214ENST00000568848 CLEC2DQ9UHP7 191 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 ADAM30Q9UKF2 790 aa11.41□□□□□ -0.58
USB1-214ENST00000568848 FCN1O00602 326 aa11.4□□□□□ -0.58
USB1-214ENST00000568848 LDLRAD4O15165 306 aa11.4□□□□□ -0.58
USB1-214ENST00000568848 ARSBP15848 533 aa11.4□□□□□ -0.58
USB1-214ENST00000568848 DCKP27707 260 aa11.4□□□□□ -0.58
USB1-214ENST00000568848 PPP1CCP36873 323 aaKnown RBP11.4□□□□□ -0.58
USB1-214ENST00000568848 PAX5Q02548 391 aa11.4□□□□□ -0.58
USB1-214ENST00000568848 SLC22A6Q4U2R8 563 aa11.4□□□□□ -0.58
USB1-214ENST00000568848 C19orf54Q5BKX5 351 aa11.4□□□□□ -0.58
USB1-214ENST00000568848 SYT6Q5T7P8 510 aaPredicted RBP11.4□□□□□ -0.58
USB1-214ENST00000568848 ASCL4Q6XD76 172 aa11.4□□□□□ -0.58
USB1-214ENST00000568848 PACRGLQ8N7B6 248 aa11.4□□□□□ -0.58
USB1-214ENST00000568848 OR52M1Q8NGK5 317 aa11.4□□□□□ -0.58
USB1-214ENST00000568848 JAM3Q9BX67 310 aa11.4□□□□□ -0.58
USB1-214ENST00000568848 FBXL15Q9H469 300 aa11.4□□□□□ -0.58
USB1-214ENST00000568848 C19orf73Q9NVV2 129 aa11.4□□□□□ -0.58
USB1-214ENST00000568848 LALBAP00709 142 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 RPSAP08865 295 aaKnown RBP11.39□□□□□ -0.59
USB1-214ENST00000568848 LGALS1P09382 135 aaKnown RBP11.39□□□□□ -0.59
USB1-214ENST00000568848 GNAO1P09471 354 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 OR5H8P0DN80 308 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 EGR2P11161 476 aaPredicted RBP11.39□□□□□ -0.59
USB1-214ENST00000568848 GZMHP20718 246 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 KCNJ3P48549 501 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 ZNF137PP52743 207 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 PITPNAQ00169 270 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 MRPL28Q13084 256 aaKnown RBP11.39□□□□□ -0.59
USB1-214ENST00000568848 HAGHQ16775 308 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 DDI2Q5TDH0 399 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms