RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 PRPSAP1Q14558 356 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 HMGN3Q15651 99 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 CEACAM21Q3KPI0 293 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 SAMD4BQ5PRF9 694 aaKnown RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 C1orf220Q5T0J3 134 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 SLC8B1Q6J4K2 584 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM205Q6UW68 189 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 TEX261Q6UWH6 196 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 AHSA2Q719I0 299 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 SLC16A13Q7RTY0 426 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 H2BFWTQ7Z2G1 175 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 BAP18Q8IXM2 172 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 ZNF683Q8IZ20 524 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM123Q8N131 208 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 GTPBP8Q8N3Z3 284 aaPredicted RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 C9orf62Q8N4C0 152 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM156Q8N614 296 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 LRRC52Q8N7C0 313 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 INO80EQ8NBZ0 244 aaPredicted RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 ZNF439Q8NDP4 499 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 OR13C4Q8NGS5 318 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 OR4S2Q8NH73 311 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 GPR151Q8TDV0 419 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 ORAOV1Q8WV07 137 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 LCN9Q8WX39 176 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM158Q8WZ71 300 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 NDRG1Q92597 394 aaKnown RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 GHSRQ92847 366 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 RERGQ96A58 199 aaPredicted RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 MAGOHBQ96A72 148 aaKnown RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 PTH2Q96A98 100 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 TLCD1Q96CP7 247 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 CMTM7Q96FZ5 175 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 FCRL1Q96LA6 429 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 PRAP1Q96NZ9 151 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 COL21A1Q96P44 957 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 TGM7Q96PF1 710 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 OR8B4Q96RC9 309 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 ZNF382Q96SR6 550 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 CNN2Q99439 309 aaKnown RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 KLF6Q99612 283 aaPredicted RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 HOPXQ9BPY8 73 aaPredicted RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 KCTD14Q9BQ13 255 aaPredicted RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 RSG1Q9BU20 258 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 TBL1XR1Q9BZK7 514 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 ACTR6Q9GZN1 396 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 OR2AG1Q9H205 316 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 TXNIPQ9H3M7 391 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 WDR55Q9H6Y2 383 aaPredicted RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 TUBG2Q9NRH3 451 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 CCL28Q9NRJ3 127 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 LYRM2Q9NU23 88 aaPredicted RBP2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 C14orf105Q9NVL8 296 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 CLCF1Q9UBD9 225 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 IKZF2Q9UKS7 526 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 HHLA2Q9UM44 414 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 SCML1Q9UN30 329 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 KPTNQ9Y664 436 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 U3KQ87 197 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 APC2O95996 2303 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 DENND4AQ7Z401 1863 aa2.31□□□□□ -2.04
HERPUD1-212ENST00000567944 CACNA1EQ15878 2313 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 SPTAN1Q13813 2472 aaKnown RBP2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 USP9XQ93008 2570 aaPredicted RBP2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 PPIAL4EA0A075B759 164 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 A0A0G2JMP0 313 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 A0A1W2PRD5 423 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 CLDN34H7C241 214 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 CDC40O60508 579 aaKnown RBP eCLIP2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 UPK3AO75631 287 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 ADAP1O75689 374 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 SCO1O75880 301 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 OR2F2O95006 317 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 MT-ND4LP03901 98 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 CD74P04233 296 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 P04436 131 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 CD5P06127 495 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 DBIP07108 87 aaKnown RBP2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 CRYGBP07316 175 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 DCNP07585 359 aaKnown RBP2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 CSF3P09919 207 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 PPIAL4FP0DN26 164 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 HIST1H1CP16403 213 aaKnown RBP2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 ZNF14P17017 642 aaPredicted RBP2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 PCMT1P22061 227 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 MYL9P24844 172 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 HTR2CP28335 458 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 CD200P41217 278 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 DUSP3P51452 185 aaPredicted RBP2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 CDKN2DP55273 166 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM33P57088 247 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 SEC61GP60059 68 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 LSM6P62312 80 aaKnown RBP2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 HMGCS1Q01581 520 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 PRKCDQ05655 676 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 BAXQ07812 192 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 TCP10Q12799 353 aa2.3□□□□□ -2.04
HERPUD1-212ENST00000567944 PMVKQ15126 192 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms