RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 C20orf204Q6ZNR8 217 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 DMRTC2Q8IXT2 367 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-221ENST00000567935 LGI3Q8N145 548 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 FAM222BQ8WU58 562 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 C2orf50Q96LR7 162 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 SLC5A7Q9GZV3 580 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 LRRC30A6NM36 301 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 FAM90A27PA6NNH2 459 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 FAM25EA8MYX2 175 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 SHISA9B4DS77 424 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-221ENST00000567935 L7N2F9 121 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 PET100P0DJ07 73 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 RPA2P15927 270 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 MSMO1Q15800 293 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 ESCO2Q56NI9 601 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 Q5BKY6 102 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 C11orf87Q6NUJ2 197 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 ADAM5Q6NVV9 412 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 LIAT1Q6ZQX7 453 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 LDLRAD3Q86YD5 345 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 OR5D13Q8NGL4 314 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 THAP6Q8TBB0 222 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 PLPPR2Q96GM1 343 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 AKR1E2Q96JD6 320 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 TOLLIPQ9H0E2 274 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 MS4A5Q9H3V2 200 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 METTL8Q9H825 291 aaKnown RBP12.22□□□□□ -0.45
COMMD4-221ENST00000567935 TAF9BQ9HBM6 251 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 GCM1Q9NP62 436 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 ATRQ13535 2644 aa12.22□□□□□ -0.45
COMMD4-221ENST00000567935 DUXBA0A1W2PPF3 345 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 CCSO14618 274 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 MPPED1O15442 326 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 ZNF737O75373 536 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 LY6G6DO95868 133 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 MUC1P15941 1255 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-221ENST00000567935 EGR1P18146 543 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 GNRHRP30968 328 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 APOBEC3AP31941 199 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-221ENST00000567935 LUMP51884 338 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-221ENST00000567935 TFF3Q07654 80 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 TMEM187Q14656 261 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 KRBOX4Q5JUW0 171 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 C1orf87Q8N0U7 546 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 ZNF561Q8N587 486 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 CD177Q8N6Q3 437 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 OR10V1Q8NGI7 309 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 PPP1R1CQ8WVI7 109 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 SECTM1Q8WVN6 248 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 GALMQ96C23 342 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 FAM234AQ9H0X4 552 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 DNTTIP1Q9H147 329 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 ZFP57Q9NU63 452 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 KIF25Q9UIL4 384 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 PPP1R3CQ9UQK1 317 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 RNF115Q9Y4L5 304 aa12.21□□□□□ -0.45
COMMD4-221ENST00000567935 HCFC1P51610 2035 aa12.21□□□□□ -0.46
COMMD4-221ENST00000567935 IGKV1D-17A0A075B6S4 117 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 FXYD6-FXYD2A0A087WZ82 144 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 TRAV14DV4A0A0A6YYC5 116 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 A0A0D9SG52 128 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 C13orf42A0A1B0GVH6 325 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.2□□□□□ -0.46
COMMD4-221ENST00000567935 NKX2-6A6NCS4 301 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 B9A039 149 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 HSPA12AO43301 675 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 OR2F2O95006 317 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 GZMHP20718 246 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 PSMB6P28072 239 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 IL2RGP31785 369 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 GABRA2P47869 451 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 CEBPDP49716 269 aaPredicted RBP12.2□□□□□ -0.46
COMMD4-221ENST00000567935 SNRPD2P62316 118 aaKnown RBP12.2□□□□□ -0.46
COMMD4-221ENST00000567935 OR2F1Q13607 317 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 ZNF345Q14585 488 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 CR1LQ2VPA4 569 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 PHLDA2Q53GA4 152 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 TEX36Q5VZQ5 186 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 ZBTB34Q8NCN2 500 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 BVESQ8NE79 360 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 ANGPTL6Q8NI99 470 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 IL22RA2Q969J5 263 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 SDSLQ96GA7 329 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 COQ2Q96H96 371 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 TMED3Q9Y3Q3 217 aa12.2□□□□□ -0.46
COMMD4-221ENST00000567935 ANK3Q12955 4377 aaKnown RBP12.19□□□□□ -0.46
COMMD4-221ENST00000567935 C3orf85A0A1B0GTC6 90 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 TUBAL3A6NHL2 446 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 E7EQL1 145 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 K7N7A8 449 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 ARPC5O15511 151 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 SPINT2O43291 252 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 MPC2O95563 127 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 OR5AC1P0C628 307 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 S100A11P31949 105 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 AESQ08117 197 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 TMEM30BQ3MIR4 351 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 STUMQ69YW2 141 aa12.19□□□□□ -0.46
COMMD4-221ENST00000567935 ZNF546Q86UE3 836 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms