RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 JPT1Q9UK76 154 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 BTBD17A6NE02 478 aa13.88□□□□□ -0.19
COMMD4-220ENST00000567720 FAM181BA6NEQ2 426 aa13.88□□□□□ -0.19
COMMD4-220ENST00000567720 SERPINE3A8MV23 424 aa13.88□□□□□ -0.19
COMMD4-220ENST00000567720 LY6LH3BQJ8 138 aa13.88□□□□□ -0.19
COMMD4-220ENST00000567720 GPR137BO60478 399 aa13.88□□□□□ -0.19
COMMD4-220ENST00000567720 CD3GP09693 182 aa13.88□□□□□ -0.19
COMMD4-220ENST00000567720 RPL5P46777 297 aaKnown RBP13.88□□□□□ -0.19
COMMD4-220ENST00000567720 TPTE2P1Q5T6R2 138 aa13.88□□□□□ -0.19
COMMD4-220ENST00000567720 C16orf87Q6PH81 154 aa13.88□□□□□ -0.19
COMMD4-220ENST00000567720 CLVS1Q8IUQ0 354 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-220ENST00000567720 OR52L2PQ8NGH6 319 aa13.88□□□□□ -0.19
COMMD4-220ENST00000567720 DCSTAMPQ9H295 470 aa13.88□□□□□ -0.19
COMMD4-220ENST00000567720 AMMECR1Q9Y4X0 333 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-220ENST00000567720 TMEM235A6NFC5 223 aa13.87□□□□□ -0.19
COMMD4-220ENST00000567720 LEUTXA8MZ59 168 aa13.87□□□□□ -0.19
COMMD4-220ENST00000567720 SCGNO76038 276 aa13.87□□□□□ -0.19
COMMD4-220ENST00000567720 PPP1CCP36873 323 aaKnown RBP13.87□□□□□ -0.19
COMMD4-220ENST00000567720 PRRX1P54821 245 aa13.87□□□□□ -0.19
COMMD4-220ENST00000567720 HTD2P86397 168 aa13.87□□□□□ -0.19
COMMD4-220ENST00000567720 DIAPH2-AS1Q14236 149 aa13.87□□□□□ -0.19
COMMD4-220ENST00000567720 LY6EQ16553 131 aa13.87□□□□□ -0.19
COMMD4-220ENST00000567720 Q3ZCU0 254 aa13.87□□□□□ -0.19
COMMD4-220ENST00000567720 LINC00311Q8N616 119 aa13.87□□□□□ -0.19
COMMD4-220ENST00000567720 C8orf31Q8N9H6 132 aa13.87□□□□□ -0.19
COMMD4-220ENST00000567720 IL1F10Q8WWZ1 152 aa13.87□□□□□ -0.19
COMMD4-220ENST00000567720 OR2S2Q9NQN1 319 aa13.87□□□□□ -0.19
COMMD4-220ENST00000567720 CEACAM3P40198 252 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 RAB13P51153 203 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 DYNLT3P51808 116 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 MADCAM1Q13477 382 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 SPCS2Q15005 226 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 ZNF260Q3ZCT1 412 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 FBLN7Q53RD9 439 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 UBE2NLQ5JXB2 153 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 SLC25A48Q6ZT89 311 aaKnown RBP13.86□□□□□ -0.19
COMMD4-220ENST00000567720 OR10X1Q8NGY0 326 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 NUDCD2Q8WVJ2 157 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 MAFIPQ8WZ33 124 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 TOMM40LQ969M1 308 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 CREB3L1Q96BA8 519 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 GALMQ96C23 342 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 KCTD12Q96CX2 325 aaKnown RBP13.86□□□□□ -0.19
COMMD4-220ENST00000567720 SCOCQ9UIL1 159 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 MGAT4AQ9UM21 535 aa13.86□□□□□ -0.19
COMMD4-220ENST00000567720 IGKV1-6A0A0C4DH72 117 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 A0A1W2PPI3 338 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 POM121CA8CG34 1229 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 CHST1O43916 411 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 GSTP1P09211 210 aaKnown RBP13.85□□□□□ -0.19
COMMD4-220ENST00000567720 SCTP09683 121 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 HKR1P10072 659 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 ZNF134P52741 427 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 MRPS15P82914 257 aaKnown RBP13.85□□□□□ -0.19
COMMD4-220ENST00000567720 RELBQ01201 579 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 ARFRP1Q13795 201 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 HERPUD1Q15011 391 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 ARL6IP1Q15041 203 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 CDNFQ49AH0 187 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 MORN2Q502X0 79 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 CT45A1Q5HYN5 189 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 HACD4Q5VWC8 232 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 SAMD12Q8N8I0 201 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 CT45A3Q8NHU0 189 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 RAB2BQ8WUD1 216 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 RPEQ96AT9 228 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 ABHD14AQ9BUJ0 271 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 PARP12Q9H0J9 701 aaKnown RBP13.85□□□□□ -0.19
COMMD4-220ENST00000567720 ABCG5Q9H222 651 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 ABCB10Q9NRK6 738 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 OR1A1Q9P1Q5 309 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 ZNF230Q9UIE0 474 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-220ENST00000567720 TCF19Q9Y242 345 aa13.85□□□□□ -0.19
COMMD4-220ENST00000567720 A0A0A6YYH2 397 aa13.84□□□□□ -0.19
COMMD4-220ENST00000567720 TMEM89A2RUT3 159 aa13.84□□□□□ -0.19
COMMD4-220ENST00000567720 A6NJ64 397 aa13.84□□□□□ -0.19
COMMD4-220ENST00000567720 HSD17B6O14756 317 aa13.84□□□□□ -0.19
COMMD4-220ENST00000567720 SSX5O60225 188 aa13.84□□□□□ -0.19
COMMD4-220ENST00000567720 RPL15P61313 204 aaKnown RBP13.84□□□□□ -0.19
COMMD4-220ENST00000567720 STEAP3Q658P3 488 aa13.84□□□□□ -0.19
COMMD4-220ENST00000567720 CCBE1Q6UXH8 406 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-220ENST00000567720 IZUMO1Q8IYV9 350 aa13.84□□□□□ -0.19
COMMD4-220ENST00000567720 OCSTAMPQ9BR26 566 aa13.84□□□□□ -0.19
COMMD4-220ENST00000567720 C1RLQ9NZP8 487 aa13.84□□□□□ -0.19
COMMD4-220ENST00000567720 SLC23A1Q9UHI7 598 aa13.84□□□□□ -0.19
COMMD4-220ENST00000567720 IGKV1D-8A0A087WSZ0 117 aa13.83□□□□□ -0.2
COMMD4-220ENST00000567720 A6NDX4 124 aa13.83□□□□□ -0.2
COMMD4-220ENST00000567720 OOSP1A8MZH6 123 aa13.83□□□□□ -0.2
COMMD4-220ENST00000567720 YPEL1O60688 119 aa13.83□□□□□ -0.2
COMMD4-220ENST00000567720 EIF4EP06730 217 aaKnown RBP13.83□□□□□ -0.2
COMMD4-220ENST00000567720 DTYMKP23919 212 aa13.83□□□□□ -0.2
COMMD4-220ENST00000567720 CD24P25063 80 aa13.83□□□□□ -0.2
COMMD4-220ENST00000567720 REG1BP48304 166 aa13.83□□□□□ -0.2
COMMD4-220ENST00000567720 RORCP51449 518 aa13.83□□□□□ -0.2
COMMD4-220ENST00000567720 ZNF137PP52743 207 aa13.83□□□□□ -0.2
COMMD4-220ENST00000567720 TMBIM6P55061 237 aa13.83□□□□□ -0.2
COMMD4-220ENST00000567720 CCDC144NLQ6NUI1 221 aa13.83□□□□□ -0.2
COMMD4-220ENST00000567720 TMEM219Q86XT9 240 aa13.83□□□□□ -0.2
COMMD4-220ENST00000567720 CFHR4Q92496 578 aa13.83□□□□□ -0.2
COMMD4-220ENST00000567720 ST6GALNAC6Q969X2 333 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms