RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	DIAPH2-AS1	Q14236	149 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	HES1	Q14469	280 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	INSL4	Q14641	139 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	IRF3	Q14653	427 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	MED22	Q15528	200 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	TMEM95	Q3KNT9	176 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	FBLN7	Q53RD9	439 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	C1orf100	Q5SVJ3	147 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM27D1	Q5T7N8	215 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	GLT8D1	Q68CQ7	371 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	TRAT1	Q6PIZ9	186 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	MOB3B	Q86TA1	216 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	LRRTM1	Q86UE6	522 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	C1QL4	Q86Z23	238 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	LINC00311	Q8N616	119 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	MINDY2	Q8NBR6	621 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	TMEM104	Q8NE00	496 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	OR4F17	Q8NGA8	305 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	OR13F1	Q8NGS4	319 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	OR4K15	Q8NH41	348 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	UBALD1	Q8TB05	177 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	PHYHIP	Q92561	330 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	R3HDM4	Q96D70	268 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635		Q96M66	194 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	OR4F4	Q96R69	305 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	CITED2	Q99967	270 aa	Predicted RBP	5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	GFOD1	Q9NXC2	390 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	KCNIP1	Q9NZI2	227 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	RCC2	Q9P258	522 aa	Known RBP	5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	RABL2A	Q9UBK7	228 aa	Predicted RBP	5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	LSM2	Q9Y333	95 aa	Known RBP	5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	IGHV3-43	A0A0B4J1X8	118 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	IGHV1-3	A0A0C4DH29	117 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	TCRBV4S1A1T	A0A5B7	111 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	SH2D7	A6NKC9	451 aa	Predicted RBP	5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	ADARB2-AS1	A8MUL3	147 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	C12orf77	C9JDV5	145 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	HSD17B6	O14756	317 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	PDCD6	O75340	191 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	SC5D	O75845	299 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	MPIG6B	O95866	241 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	HBZ	P02008	142 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	HSMCR30	P0CW71	290 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	IGHV3-43D	P0DP04	118 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	CD37	P11049	281 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	TMEM11	P17152	192 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	RCC1	P18754	421 aa	Predicted RBP	5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	IL3RA	P26951	378 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	MAP2K4	P45985	399 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	TMBIM6	P55061	237 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	ZNF816	Q0VGE8	651 aa	Predicted RBP	5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	TPBG	Q13641	420 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	EBI3	Q14213	229 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	HNF4G	Q14541	408 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	TRAM1	Q15629	374 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	NEDD8	Q15843	81 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	RGS21	Q2M5E4	152 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	TMEM30B	Q3MIR4	351 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635		Q3ZCU0	254 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	HSD17B12	Q53GQ0	312 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	C9orf152	Q5JTZ5	239 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	C6orf183	Q5T699	404 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	UBE2U	Q5VVX9	321 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	LIPK	Q5VXJ0	399 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	STEAP3	Q658P3	488 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	SIGIRR	Q6IA17	410 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM53A	Q6NSI3	398 aa	Predicted RBP	5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	CLVS1	Q8IUQ0	354 aa	Predicted RBP	5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	GAPT	Q8N292	157 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	OR56B4	Q8NH76	319 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	OR1L1	Q8NH94	360 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	KCNG3	Q8TAE7	436 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	CHPT1	Q8WUD6	406 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	FCGR1B	Q92637	280 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	UFD1	Q92890	307 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	TMEM203	Q969S6	136 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	ST6GALNAC6	Q969X2	333 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM46B	Q96A09	425 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	NEDD4L	Q96PU5	975 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	CST11	Q9H112	138 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	ISYNA1	Q9NPH2	558 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	ACOT13	Q9NPJ3	140 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	GNG12	Q9UBI6	72 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	MOB4	Q9Y3A3	225 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635	SORL1	Q92673	2214 aa		5.5	□□□□□ -1.53
SF3B3-209	ENST00000567635		A0A1W2PRX2	142 aa		5.49	□□□□□ -1.53
SF3B3-209	ENST00000567635		G3V4G9	280 aa		5.49	□□□□□ -1.53
SF3B3-209	ENST00000567635	FGF16	O43320	207 aa		5.49	□□□□□ -1.53
SF3B3-209	ENST00000567635	IGKV1D-33	P01593	117 aa		5.49	□□□□□ -1.53
SF3B3-209	ENST00000567635	IGKV1-33	P01594	117 aa		5.49	□□□□□ -1.53
SF3B3-209	ENST00000567635	UCHL1	P09936	223 aa		5.49	□□□□□ -1.53
SF3B3-209	ENST00000567635	VSIG8	P0DPA2	414 aa		5.49	□□□□□ -1.53
SF3B3-209	ENST00000567635	CPE	P16870	476 aa		5.49	□□□□□ -1.53
SF3B3-209	ENST00000567635	HTR2C	P28335	458 aa		5.49	□□□□□ -1.53
SF3B3-209	ENST00000567635	CD1B	P29016	333 aa		5.49	□□□□□ -1.53
SF3B3-209	ENST00000567635	REG1B	P48304	166 aa		5.49	□□□□□ -1.53
SF3B3-209	ENST00000567635	ZNF134	P52741	427 aa		5.49	□□□□□ -1.53
SF3B3-209	ENST00000567635	RPS27A	P62979	156 aa	Known RBP	5.49	□□□□□ -1.53
SF3B3-209	ENST00000567635	TBCE	Q15813	527 aa	Predicted RBP	5.49	□□□□□ -1.53
SF3B3-209	ENST00000567635	LINC01559	Q495D7	138 aa		5.49	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms