RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 I3L4J1 428 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 CASQ2O14958 399 aaPredicted RBP-0.02□□□□□ -2.41
CDH1-211ENST00000567320 PLA2G10O15496 165 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 AKR7A2O43488 359 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 CD8AP01732 235 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 ARR3P36575 388 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 AKR1C3P42330 323 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 TSPEAR-AS2P59090 65 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 PSMC5P62195 406 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 EMX1Q04741 257 aaPredicted RBP-0.02□□□□□ -2.41
CDH1-211ENST00000567320 GLO1Q04760 184 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 PDK2Q15119 407 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 RESP18Q5W5W9 173 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 SLC35E3Q7Z769 313 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 OR5J2Q8NH18 312 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 FAAP24Q9BTP7 215 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 MND1Q9BWT6 205 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 C11orf49Q9H6J7 331 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 SDHAF2Q9NX18 166 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 V9GYY9 64 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 REREQ9P2R6 1566 aa-0.02□□□□□ -2.41
CDH1-211ENST00000567320 SLX4Q8IY92 1834 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 FAT4Q6V0I7 4981 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 DIDO1Q9BTC0 2240 aaKnown RBP-0.03□□□□□ -2.41
CDH1-211ENST00000567320 TRAV8-2A0A0B4J237 113 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 NCF1BA6NI72 391 aaPredicted RBP-0.03□□□□□ -2.41
CDH1-211ENST00000567320 FAM183AA6NL82 134 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 CCDC169A6NNP5 214 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 NCF1CA8MVU1 366 aaPredicted RBP-0.03□□□□□ -2.41
CDH1-211ENST00000567320 ZNF728P0DKX0 622 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 ANXA8P13928 327 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 CRHBPP24387 322 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 SERPINB10P48595 397 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 BCAP31P51572 246 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 RAB38P57729 211 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 PABPC1L2AQ5JQF8 200 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 CHCHD2P9Q5T1J5 151 aaPredicted RBP-0.03□□□□□ -2.41
CDH1-211ENST00000567320 ANXA8L1Q5VT79 327 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 LHFPL1Q86WI0 220 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 FAM19A2Q8N3H0 131 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 BBOF1Q8ND07 529 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 OR8G5Q8NG78 346 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 ZMYND19Q96E35 227 aaPredicted RBP-0.03□□□□□ -2.41
CDH1-211ENST00000567320 PITX2Q99697 317 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 EBPLQ9BY08 206 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 IQCGQ9H095 443 aaKnown RBP-0.03□□□□□ -2.41
CDH1-211ENST00000567320 C11orf1Q9H5F2 150 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 METTL17Q9H7H0 456 aaPredicted RBP-0.03□□□□□ -2.41
CDH1-211ENST00000567320 SNX12Q9UMY4 172 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 RRP15Q9Y3B9 282 aaKnown RBP-0.03□□□□□ -2.41
CDH1-211ENST00000567320 ALG5Q9Y673 324 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 YLPM1P49750 1951 aaKnown RBP-0.03□□□□□ -2.41
CDH1-211ENST00000567320 MYO15BQ96JP2 1530 aa-0.03□□□□□ -2.41
CDH1-211ENST00000567320 DNMT1P26358 1616 aaKnown RBP-0.04□□□□□ -2.42
CDH1-211ENST00000567320 CDK14O94921 469 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 FBP1P09467 338 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 KRTAP2-3P0C7H8 128 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 TSPOP30536 169 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 DYNLL1P63167 89 aaKnown RBP-0.04□□□□□ -2.42
CDH1-211ENST00000567320 HIKESHIQ53FT3 197 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 ARHGAP18Q8N392 663 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 OR11L1Q8NGX0 322 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 OR2AE1Q8NHA4 323 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 PRSS27Q9BQR3 290 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 MIEN1Q9BRT3 115 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 KRTAP2-4Q9BYR9 128 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 KRTAP2-1Q9BYU5 128 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 CHST5Q9GZS9 411 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 CST9LQ9H4G1 147 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 MED9Q9NWA0 146 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 IFNKQ9P0W0 207 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 FIS1Q9Y3D6 152 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 MYOFQ9NZM1 2061 aa-0.04□□□□□ -2.42
CDH1-211ENST00000567320 ATAD5Q96QE3 1844 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.05□□□□□ -2.42
CDH1-211ENST00000567320 OR5K4A6NMS3 321 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 C8orf87E5RJ46 101 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 PSMD11O00231 422 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 SLC17A3O00476 420 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 PRH1P02810 166 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 BPGMP07738 259 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 FGF4P08620 206 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 SULT1A2P50226 295 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 BAXQ07812 192 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 LRRC74AQ0VAA2 488 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 LGALS9BQ3B8N2 356 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 FAM43BQ6ZT52 329 aaPredicted RBP-0.05□□□□□ -2.42
CDH1-211ENST00000567320 FAM19A1Q7Z5A9 133 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 DOLPP1Q86YN1 238 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 ZBTB8OSQ8IWT0 167 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 Q8N2B8 174 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 YIPF7Q8N8F6 280 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 LFNGQ8NES3 379 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 OR5D18Q8NGL1 313 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 OR4P4Q8NGL7 312 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 GALMQ96C23 342 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 ZNF707Q96C28 371 aaPredicted RBP-0.05□□□□□ -2.42
CDH1-211ENST00000567320 VCX3BQ9H321 246 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 CHRAC1Q9NRG0 131 aa-0.05□□□□□ -2.42
CDH1-211ENST00000567320 HHLA3Q9XRX5 114 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms