RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 GNMTQ14749 295 aa11.94□□□□□ -0.5
PALB2-205ENST00000567003 ZIK1Q3SY52 487 aaPredicted RBP11.94□□□□□ -0.5
PALB2-205ENST00000567003 NHLRC3Q5JS37 347 aa11.94□□□□□ -0.5
PALB2-205ENST00000567003 SYT6Q5T7P8 510 aaPredicted RBP11.94□□□□□ -0.5
PALB2-205ENST00000567003 ACSM6Q6P461 480 aa11.94□□□□□ -0.5
PALB2-205ENST00000567003 OR6Q1Q8NGQ2 317 aa11.94□□□□□ -0.5
PALB2-205ENST00000567003 OR4K15Q8NH41 348 aa11.94□□□□□ -0.5
PALB2-205ENST00000567003 ISOC1Q96CN7 298 aa11.94□□□□□ -0.5
PALB2-205ENST00000567003 ANKRD60Q9BZ19 345 aa11.94□□□□□ -0.5
PALB2-205ENST00000567003 TOLLIPQ9H0E2 274 aa11.94□□□□□ -0.5
PALB2-205ENST00000567003 A3GALT2U3KPV4 340 aa11.94□□□□□ -0.5
PALB2-205ENST00000567003 LDLRAD4O15165 306 aa11.93□□□□□ -0.5
PALB2-205ENST00000567003 HLA-DRB1P01911 266 aa11.93□□□□□ -0.5
PALB2-205ENST00000567003 HBZP02008 142 aa11.93□□□□□ -0.5
PALB2-205ENST00000567003 CSTBP04080 98 aaKnown RBP11.93□□□□□ -0.5
PALB2-205ENST00000567003 RPSAP08865 295 aaKnown RBP11.93□□□□□ -0.5
PALB2-205ENST00000567003 SNRPGP62308 76 aaKnown RBP11.93□□□□□ -0.5
PALB2-205ENST00000567003 ADARB1P78563 741 aaKnown RBP11.93□□□□□ -0.5
PALB2-205ENST00000567003 DDI2Q5TDH0 399 aa11.93□□□□□ -0.5
PALB2-205ENST00000567003 SYS1Q8N2H4 156 aa11.93□□□□□ -0.5
PALB2-205ENST00000567003 TRUB1Q8WWH5 349 aaKnown RBP11.93□□□□□ -0.5
PALB2-205ENST00000567003 CHCHD6Q9BRQ6 235 aa11.93□□□□□ -0.5
PALB2-205ENST00000567003 AMBNQ9NP70 447 aa11.93□□□□□ -0.5
PALB2-205ENST00000567003 TPSG1Q9NRR2 321 aa11.93□□□□□ -0.5
PALB2-205ENST00000567003 IL36GQ9NZH8 169 aa11.93□□□□□ -0.5
PALB2-205ENST00000567003 FRAS1Q86XX4 4008 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 A0A1W2PN81 502 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 SPINT2O43291 252 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 LANCL1O43813 399 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 IGHV3-11P01762 117 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 LGALS1P09382 135 aaKnown RBP11.92□□□□□ -0.5
PALB2-205ENST00000567003 RCC1P18754 421 aaPredicted RBP11.92□□□□□ -0.5
PALB2-205ENST00000567003 CHRNA7P36544 502 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 C5orf64Q2M2E5 130 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 Q3ZCU0 254 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 SLC22A6Q4U2R8 563 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 SLC25A30Q5SVS4 291 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 XAF1Q6GPH4 301 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 Q8N1Y9 231 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 MINDY2Q8NBR6 621 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 MRPL48Q96GC5 212 aaKnown RBP11.92□□□□□ -0.5
PALB2-205ENST00000567003 ZNF251Q9BRH9 671 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 ERVK13-1Q9NX77 482 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 TRAPPC2LQ9UL33 140 aa11.92□□□□□ -0.5
PALB2-205ENST00000567003 NBR2O15453 112 aa11.91□□□□□ -0.5
PALB2-205ENST00000567003 ZNF93P35789 620 aaPredicted RBP11.91□□□□□ -0.5
PALB2-205ENST00000567003 OR3A3P47888 321 aa11.91□□□□□ -0.5
PALB2-205ENST00000567003 PITPNAQ00169 270 aa11.91□□□□□ -0.5
PALB2-205ENST00000567003 LRRC36Q1X8D7 754 aa11.91□□□□□ -0.5
PALB2-205ENST00000567003 MPV17LQ2QL34 196 aa11.91□□□□□ -0.5
PALB2-205ENST00000567003 C19orf54Q5BKX5 351 aa11.91□□□□□ -0.5
PALB2-205ENST00000567003 MEDAGQ5VYS4 303 aa11.91□□□□□ -0.5
PALB2-205ENST00000567003 LINC00596Q86U02 117 aa11.91□□□□□ -0.5
PALB2-205ENST00000567003 ODF3L1Q8IXM7 274 aa11.91□□□□□ -0.5
PALB2-205ENST00000567003 STX19Q8N4C7 294 aa11.91□□□□□ -0.5
PALB2-205ENST00000567003 OR52L2PQ8NGH6 319 aa11.91□□□□□ -0.5
PALB2-205ENST00000567003 OR13C5Q8NGS8 318 aa11.91□□□□□ -0.5
PALB2-205ENST00000567003 CENPNQ96H22 339 aaPredicted RBP11.91□□□□□ -0.5
PALB2-205ENST00000567003 NABP2Q9BQ15 211 aa11.91□□□□□ -0.5
PALB2-205ENST00000567003 ETAA1Q9NY74 926 aa11.91□□□□□ -0.5
PALB2-205ENST00000567003 OR8U9P0C7N5 309 aa11.9□□□□□ -0.5
PALB2-205ENST00000567003 FCGR1AP12314 374 aa11.9□□□□□ -0.5
PALB2-205ENST00000567003 SNRPBP14678 240 aaKnown RBP11.9□□□□□ -0.5
PALB2-205ENST00000567003 PPP1CCP36873 323 aaKnown RBP11.9□□□□□ -0.5
PALB2-205ENST00000567003 GBX2P52951 348 aaPredicted RBP11.9□□□□□ -0.5
PALB2-205ENST00000567003 C1orf146Q5VVC0 180 aa11.9□□□□□ -0.5
PALB2-205ENST00000567003 TMEM106AQ96A25 262 aa11.9□□□□□ -0.5
PALB2-205ENST00000567003 OR4C12Q96R67 309 aa11.9□□□□□ -0.5
PALB2-205ENST00000567003 S100A13Q99584 98 aa11.9□□□□□ -0.5
PALB2-205ENST00000567003 ABHD14AQ9BUJ0 271 aa11.9□□□□□ -0.5
PALB2-205ENST00000567003 RSRP1Q9BUV0 290 aa11.9□□□□□ -0.5
PALB2-205ENST00000567003 GHITMQ9H3K2 345 aa11.9□□□□□ -0.5
PALB2-205ENST00000567003 OR2S2Q9NQN1 319 aa11.9□□□□□ -0.5
PALB2-205ENST00000567003 C19orf73Q9NVV2 129 aa11.9□□□□□ -0.5
PALB2-205ENST00000567003 RCC2Q9P258 522 aaKnown RBP11.9□□□□□ -0.5
PALB2-205ENST00000567003 FOXA2Q9Y261 457 aaPredicted RBP11.9□□□□□ -0.5
PALB2-205ENST00000567003 EI24O14681 340 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 ALPLP05186 524 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 GABRB1P18505 474 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 BDKRB2P30411 391 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 PPP3R1P63098 170 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 MORN2Q502X0 79 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 C6orf183Q5T699 404 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 RAB12Q6IQ22 244 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 LIN54Q6MZP7 749 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 OR52I1Q8NGK6 324 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 GPR148Q8TDV2 347 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 ABHD5Q8WTS1 349 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 MS4A10Q96PG2 267 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 FAM103A1Q9BTL3 118 aaKnown RBP11.89□□□□□ -0.51
PALB2-205ENST00000567003 FBXL15Q9H469 300 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 TAF9BQ9HBM6 251 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 TMEM138Q9NPI0 162 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 PLA2G2EQ9NZK7 142 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 KIAA1456Q9P272 454 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 GAB2Q9UQC2 676 aa11.89□□□□□ -0.51
PALB2-205ENST00000567003 MRPS28Q9Y2Q9 187 aaKnown RBP11.89□□□□□ -0.51
PALB2-205ENST00000567003 UBE2QL1A1L167 161 aa11.88□□□□□ -0.51
PALB2-205ENST00000567003 MCRIP1C9JLW8 97 aa11.88□□□□□ -0.51
PALB2-205ENST00000567003 FCN1O00602 326 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms