RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 PDLIM3Q53GG5 364 aaPredicted RBP8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 C10orf99Q6UWK7 81 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 C5orf24Q7Z6I8 188 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 MS4A15Q8N5U1 240 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 OR4X2Q8NGF9 303 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 NICN1Q9BSH3 213 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 NCOR1P1Q9H4R4 102 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 IFT22Q9H7X7 185 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 LINC00527Q9UJ94 153 aa8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 LSM2Q9Y333 95 aaKnown RBP8.06□□□□□ -1.12
GTF3C1-206ENST00000566779 IGHV1-3A0A0C4DH29 117 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 SERPINE3A8MV23 424 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 C15orf65H3BRN8 121 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 M0QZK8 103 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 PDCD6O75340 191 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 HBZP02008 142 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 GAPDHP04406 335 aaKnown RBP8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 CD1AP06126 327 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 CPEP16870 476 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 GZMHP20718 246 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 FUT3P21217 361 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 MYF6P23409 242 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 PPP1CCP36873 323 aaKnown RBP8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 SLC35A2P78381 396 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 LRRTM1Q86UE6 522 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 NDUFA11Q86Y39 141 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 OR4F17Q8NGA8 305 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 OR10A7Q8NGE5 316 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 IL1F10Q8WWZ1 152 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 NOL4LQ96MY1 436 aaPredicted RBP8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 OR4F4Q96R69 305 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 UQCC2Q9BRT2 126 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 ANKRD60Q9BZ19 345 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 TAF9BQ9HBM6 251 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 RAB9BQ9NP90 201 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 OR2S2Q9NQN1 319 aa8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 RCC2Q9P258 522 aaKnown RBP8.05□□□□□ -1.12
GTF3C1-206ENST00000566779 TRRAPQ9Y4A5 3859 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 PSMB11A5LHX3 300 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 NUDT19A8MXV4 375 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 ORC5O43913 435 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 OPN1MWP04001 364 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 UBBP0CG47 229 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 OPN1MW2P0DN77 364 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 OPN1MW3P0DN78 364 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 SRMP19623 302 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 CALRP27797 417 aaKnown RBP8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 HTR2CP28335 458 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 CLDN12P56749 244 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 PAX5Q02548 391 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 RAB11BQ15907 218 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 SIGIRRQ6IA17 410 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 TRAT1Q6PIZ9 186 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 C6orf201Q7Z4U5 140 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 ZNF329Q86UD4 541 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 TGIF2LXQ8IUE1 241 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 OR8H3Q8N146 312 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 OR52L2PQ8NGH6 319 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 MRPS24Q96EL2 167 aaKnown RBP8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 SULT4A1Q9BR01 284 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 FAAP24Q9BTP7 215 aa8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 AK6Q9Y3D8 172 aaKnown RBP8.04□□□□□ -1.12
GTF3C1-206ENST00000566779 FAM90A10PA6NDY2 464 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 FAM90A18PA6NE21 464 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 FAM90A16PA6NEW6 464 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 FAM90A20PA6NIJ5 464 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 FAM90A7PA6NKC0 464 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 FAM90A12PA8MX19 464 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 FAM90A5PA8MXJ8 464 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 FAM90A23PA8MXZ1 464 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 ZNF736B4DX44 427 aaPredicted RBP8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 AMY1AP04745 511 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 AMY2AP04746 511 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 FAM90A15PP0C7V4 464 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 FAM90A13PP0C7W8 464 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 FAM90A14PP0C7W9 464 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 FAM90A24PP0C7X0 464 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 BLVRBP30043 206 aaPredicted RBP8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 HSPA13P48723 471 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 GP2P55259 537 aaKnown RBP8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 LOXL3P58215 753 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 RPS27AP62979 156 aaKnown RBP8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 EMX1Q04741 257 aaPredicted RBP8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 UNC119Q13432 240 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 IRF3Q14653 427 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 HES5Q5TA89 166 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 SLC35E3Q7Z769 313 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 CDH26Q8IXH8 852 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 C5orf56Q8N8D9 126 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 OR6M1Q8NGM8 313 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 KCNG3Q8TAE7 436 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 MRPL30Q8TCC3 161 aaKnown RBP8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 RTN4IP1Q8WWV3 396 aaPredicted RBP8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 PHYHIPQ92561 330 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 ABHD14AQ9BUJ0 271 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 LINC00574Q9H8X3 128 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 ABRACLQ9P1F3 81 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 U3KQE9 123 aa8.03□□□□□ -1.12
GTF3C1-206ENST00000566779 SMIM30A4D0T7 59 aa8.02□□□□□ -1.13
GTF3C1-206ENST00000566779 ARL6IP5O75915 188 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms