RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 OR10V1Q8NGI7 309 aa15.91■□□□□ 0.14
CLN6-207ENST00000566347 CT45A3Q8NHU0 189 aa15.91■□□□□ 0.14
CLN6-207ENST00000566347 TFAP2CQ92754 450 aa15.91■□□□□ 0.14
CLN6-207ENST00000566347 RASL11BQ9BPW5 248 aa15.91■□□□□ 0.14
CLN6-207ENST00000566347 TAF9BQ9HBM6 251 aa15.91■□□□□ 0.14
CLN6-207ENST00000566347 MBNL3Q9NUK0 354 aaKnown RBP15.91■□□□□ 0.14
CLN6-207ENST00000566347 UBE2QL1A1L167 161 aa15.9■□□□□ 0.14
CLN6-207ENST00000566347 CDK1P06493 297 aa15.9■□□□□ 0.14
CLN6-207ENST00000566347 THBS3P49746 956 aa15.9■□□□□ 0.14
CLN6-207ENST00000566347 ZNF134P52741 427 aa15.9■□□□□ 0.14
CLN6-207ENST00000566347 GABPB1Q06547 395 aaPredicted RBP15.9■□□□□ 0.14
CLN6-207ENST00000566347 ACSM3Q53FZ2 586 aa15.9■□□□□ 0.14
CLN6-207ENST00000566347 UNQ9370/PRO34162Q6UXP9 181 aa15.9■□□□□ 0.14
CLN6-207ENST00000566347 ETV3LQ6ZN32 361 aa15.9■□□□□ 0.14
CLN6-207ENST00000566347 PHYHIPQ92561 330 aa15.9■□□□□ 0.14
CLN6-207ENST00000566347 DPF1Q92782 380 aa15.9■□□□□ 0.14
CLN6-207ENST00000566347 FAM46BQ96A09 425 aa15.9■□□□□ 0.14
CLN6-207ENST00000566347 S1PR3Q99500 378 aa15.9■□□□□ 0.14
CLN6-207ENST00000566347 OR2S2Q9NQN1 319 aa15.9■□□□□ 0.14
CLN6-207ENST00000566347 PLSCR3Q9NRY6 295 aa15.9■□□□□ 0.14
CLN6-207ENST00000566347 H0YHG0 523 aa15.89■□□□□ 0.13
CLN6-207ENST00000566347 LANCL1O43813 399 aa15.89■□□□□ 0.13
CLN6-207ENST00000566347 MPIG6BO95866 241 aa15.89■□□□□ 0.13
CLN6-207ENST00000566347 MYCNOSP40205 109 aa15.89■□□□□ 0.13
CLN6-207ENST00000566347 VHLP40337 213 aa15.89■□□□□ 0.13
CLN6-207ENST00000566347 PNLIPRP3Q17RR3 467 aa15.89■□□□□ 0.13
CLN6-207ENST00000566347 GLT8D1Q68CQ7 371 aa15.89■□□□□ 0.13
CLN6-207ENST00000566347 C8orf86Q6ZUL3 223 aa15.89■□□□□ 0.13
CLN6-207ENST00000566347 KLHL30-AS1Q8NEE0 82 aa15.89■□□□□ 0.13
CLN6-207ENST00000566347 MCRIP2Q9BUT9 160 aaKnown RBP15.89■□□□□ 0.13
CLN6-207ENST00000566347 JPT1Q9UK76 154 aa15.89■□□□□ 0.13
CLN6-207ENST00000566347 LINC01548A6NM66 108 aa15.88■□□□□ 0.13
CLN6-207ENST00000566347 ZNF736B4DX44 427 aaPredicted RBP15.88■□□□□ 0.13
CLN6-207ENST00000566347 RRP9O43818 475 aaKnown RBP15.88■□□□□ 0.13
CLN6-207ENST00000566347 HTD2P86397 168 aa15.88■□□□□ 0.13
CLN6-207ENST00000566347 MORN2Q502X0 79 aa15.88■□□□□ 0.13
CLN6-207ENST00000566347 NKAPLQ5M9Q1 402 aa15.88■□□□□ 0.13
CLN6-207ENST00000566347 ZNF695Q8IW36 515 aa15.88■□□□□ 0.13
CLN6-207ENST00000566347 MRPL30Q8TCC3 161 aaKnown RBP15.88■□□□□ 0.13
CLN6-207ENST00000566347 NEDD4LQ96PU5 975 aa15.88■□□□□ 0.13
CLN6-207ENST00000566347 TMED9Q9BVK6 235 aa15.88■□□□□ 0.13
CLN6-207ENST00000566347 DCLRE1BQ9H816 532 aa15.88■□□□□ 0.13
CLN6-207ENST00000566347 SCN3BQ9NY72 215 aa15.88■□□□□ 0.13
CLN6-207ENST00000566347 LRRC42Q9Y546 428 aa15.88■□□□□ 0.13
CLN6-207ENST00000566347 PTGES3LE9PB15 166 aa15.87■□□□□ 0.13
CLN6-207ENST00000566347 RGS11O94810 467 aa15.87■□□□□ 0.13
CLN6-207ENST00000566347 EGFEM1PQ0D2K5 195 aa15.87■□□□□ 0.13
CLN6-207ENST00000566347 LSAMPQ13449 338 aa15.87■□□□□ 0.13
CLN6-207ENST00000566347 INSL4Q14641 139 aa15.87■□□□□ 0.13
CLN6-207ENST00000566347 SPHARQ15513 63 aa15.87■□□□□ 0.13
CLN6-207ENST00000566347 RBM48Q5RL73 367 aaKnown RBP15.87■□□□□ 0.13
CLN6-207ENST00000566347 C1orf100Q5SVJ3 147 aa15.87■□□□□ 0.13
CLN6-207ENST00000566347 C6orf141Q5SZD1 244 aa15.87■□□□□ 0.13
CLN6-207ENST00000566347 C18orf65Q6ZTR6 163 aa15.87■□□□□ 0.13
CLN6-207ENST00000566347 LRRTM1Q86UE6 522 aa15.87■□□□□ 0.13
CLN6-207ENST00000566347 FAM71E2Q8N5Q1 922 aa15.87■□□□□ 0.13
CLN6-207ENST00000566347 ABHD14AQ9BUJ0 271 aa15.87■□□□□ 0.13
CLN6-207ENST00000566347 TMEM59Q9BXS4 323 aa15.87■□□□□ 0.13
CLN6-207ENST00000566347 K7EIL1 84 aa15.86■□□□□ 0.13
CLN6-207ENST00000566347 VSIG8P0DPA2 414 aa15.86■□□□□ 0.13
CLN6-207ENST00000566347 CHATP28329 748 aa15.86■□□□□ 0.13
CLN6-207ENST00000566347 SOX6P35712 828 aa15.86■□□□□ 0.13
CLN6-207ENST00000566347 GP2P55259 537 aaKnown RBP15.86■□□□□ 0.13
CLN6-207ENST00000566347 RPS27AP62979 156 aaKnown RBP15.86■□□□□ 0.13
CLN6-207ENST00000566347 FOXE3Q13461 319 aa15.86■□□□□ 0.13
CLN6-207ENST00000566347 CXorf66Q5JRM2 361 aaPredicted RBP15.86■□□□□ 0.13
CLN6-207ENST00000566347 LY6G6FQ5SQ64 297 aa15.86■□□□□ 0.13
CLN6-207ENST00000566347 FAM27D1Q5T7N8 215 aa15.86■□□□□ 0.13
CLN6-207ENST00000566347 KCNG3Q8TAE7 436 aa15.86■□□□□ 0.13
CLN6-207ENST00000566347 GALMQ96C23 342 aa15.86■□□□□ 0.13
CLN6-207ENST00000566347 P2RX4Q99571 388 aa15.86■□□□□ 0.13
CLN6-207ENST00000566347 LSM2Q9Y333 95 aaKnown RBP15.86■□□□□ 0.13
CLN6-207ENST00000566347 YPEL1O60688 119 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 ELANEP08246 267 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 SRMP19623 302 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 PPP1CCP36873 323 aaKnown RBP15.85■□□□□ 0.13
CLN6-207ENST00000566347 F2RL1P55085 397 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 KRTAP10-11P60412 298 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 GNMTQ14749 295 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 MED22Q15528 200 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 HSD17B12Q53GQ0 312 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 CEACAM19Q7Z692 300 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 RNF152Q8N8N0 203 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 OR52L2PQ8NGH6 319 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 YPEL2Q96QA6 119 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 SULT4A1Q9BR01 284 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 ABRACLQ9P1F3 81 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 ZNF580Q9UK33 172 aa15.85■□□□□ 0.13
CLN6-207ENST00000566347 RPLP1P05386 114 aaKnown RBP15.84■□□□□ 0.13
CLN6-207ENST00000566347 VDAC1P21796 283 aa15.84■□□□□ 0.13
CLN6-207ENST00000566347 HTR2CP28335 458 aa15.84■□□□□ 0.13
CLN6-207ENST00000566347 HOXD3P31249 432 aaPredicted RBP15.84■□□□□ 0.13
CLN6-207ENST00000566347 OR10K2Q6IF99 312 aa15.84■□□□□ 0.13
CLN6-207ENST00000566347 UFD1Q92890 307 aa15.84■□□□□ 0.13
CLN6-207ENST00000566347 HSPB9Q9BQS6 159 aa15.84■□□□□ 0.13
CLN6-207ENST00000566347 TM2D1Q9BX74 207 aa15.84■□□□□ 0.13
CLN6-207ENST00000566347 ZMAT5Q9UDW3 170 aaKnown RBP15.84■□□□□ 0.13
CLN6-207ENST00000566347 SLC22A1O15245 554 aa15.83■□□□□ 0.12
CLN6-207ENST00000566347 IGF1P05019 195 aa15.83■□□□□ 0.12
CLN6-207ENST00000566347 UCHL1P09936 223 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms