RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CTRLP40313 264 aa2.55□□□□□ -2
CHD9-218ENST00000566029 AESQ08117 197 aa2.55□□□□□ -2
CHD9-218ENST00000566029 ZNF154Q13106 437 aa2.55□□□□□ -2
CHD9-218ENST00000566029 NRN1LQ496H8 165 aa2.55□□□□□ -2
CHD9-218ENST00000566029 DTWD2Q8NBA8 298 aa2.55□□□□□ -2
CHD9-218ENST00000566029 DCBLD2Q96PD2 775 aa2.55□□□□□ -2
CHD9-218ENST00000566029 FAM234AQ9H0X4 552 aa2.55□□□□□ -2
CHD9-218ENST00000566029 POLR1DQ9Y2S0 133 aa2.55□□□□□ -2
CHD9-218ENST00000566029 A0A0D9SEW6 157 aa2.55□□□□□ -2
CHD9-218ENST00000566029 IGSF23A1L1A6 192 aa2.55□□□□□ -2
CHD9-218ENST00000566029 FAM221AA4D161 298 aa2.55□□□□□ -2
CHD9-218ENST00000566029 CTSBP07858 339 aa2.55□□□□□ -2
CHD9-218ENST00000566029 G6PCP35575 357 aa2.55□□□□□ -2
CHD9-218ENST00000566029 P2RY1P47900 373 aa2.55□□□□□ -2
CHD9-218ENST00000566029 ACSF3Q4G176 576 aaPredicted RBP2.55□□□□□ -2
CHD9-218ENST00000566029 TMEM184AQ6ZMB5 413 aa2.55□□□□□ -2
CHD9-218ENST00000566029 ZG16BQ96DA0 208 aa2.55□□□□□ -2
CHD9-218ENST00000566029 MS4A10Q96PG2 267 aa2.55□□□□□ -2
CHD9-218ENST00000566029 TRAPPC1Q9Y5R8 145 aa2.55□□□□□ -2
CHD9-218ENST00000566029 TNFRSF6BO95407 300 aa2.54□□□□□ -2
CHD9-218ENST00000566029 DDAH2O95865 285 aa2.54□□□□□ -2
CHD9-218ENST00000566029 VSIG8P0DPA2 414 aa2.54□□□□□ -2
CHD9-218ENST00000566029 CEACAM1P13688 526 aa2.54□□□□□ -2
CHD9-218ENST00000566029 RHOBP62745 196 aa2.54□□□□□ -2
CHD9-218ENST00000566029 GPR18Q14330 331 aa2.54□□□□□ -2
CHD9-218ENST00000566029 TDRG1Q3Y452 100 aa2.54□□□□□ -2
CHD9-218ENST00000566029 BHLHA15Q7RTS1 189 aaPredicted RBP2.54□□□□□ -2
CHD9-218ENST00000566029 SGPP2Q8IWX5 399 aa2.54□□□□□ -2
CHD9-218ENST00000566029 OR4F5Q8NH21 305 aa2.54□□□□□ -2
CHD9-218ENST00000566029 SNX22Q96L94 193 aa2.54□□□□□ -2
CHD9-218ENST00000566029 OR2V2Q96R30 315 aa2.54□□□□□ -2
CHD9-218ENST00000566029 OR4F4Q96R69 305 aa2.54□□□□□ -2
CHD9-218ENST00000566029 ZNF160Q9HCG1 818 aa2.54□□□□□ -2
CHD9-218ENST00000566029 Q9N2K0 584 aa2.54□□□□□ -2
CHD9-218ENST00000566029 PRTFDC1Q9NRG1 225 aa2.54□□□□□ -2
CHD9-218ENST00000566029 C20orf141Q9NUB4 165 aa2.54□□□□□ -2
CHD9-218ENST00000566029 FBXL7Q9UJT9 491 aa2.54□□□□□ -2
CHD9-218ENST00000566029 NDUFB4O95168 129 aa2.54□□□□□ -2
CHD9-218ENST00000566029 KLKB1P03952 638 aa2.54□□□□□ -2
CHD9-218ENST00000566029 UMODP07911 640 aa2.54□□□□□ -2
CHD9-218ENST00000566029 METAP1P53582 386 aa2.54□□□□□ -2
CHD9-218ENST00000566029 ZNF77Q15935 545 aa2.54□□□□□ -2
CHD9-218ENST00000566029 RPEL1Q2QD12 228 aa2.54□□□□□ -2
CHD9-218ENST00000566029 LINC01545Q5VT33 79 aa2.54□□□□□ -2
CHD9-218ENST00000566029 Q6ZWC4 215 aa2.54□□□□□ -2
CHD9-218ENST00000566029 OR11L1Q8NGX0 322 aa2.54□□□□□ -2
CHD9-218ENST00000566029 HIST1H4GQ99525 98 aa2.54□□□□□ -2
CHD9-218ENST00000566029 ZNF581Q9P0T4 197 aa2.54□□□□□ -2
CHD9-218ENST00000566029 K7EQS6 105 aa2.54□□□□□ -2
CHD9-218ENST00000566029 IGLC2P0DOY2 106 aa2.54□□□□□ -2
CHD9-218ENST00000566029 IGLC3P0DOY3 106 aa2.54□□□□□ -2
CHD9-218ENST00000566029 TAS2R46P59540 309 aa2.54□□□□□ -2
CHD9-218ENST00000566029 UBE2NP61088 152 aaKnown RBP2.54□□□□□ -2
CHD9-218ENST00000566029 DPY19L2P2Q6ZN68 376 aa2.54□□□□□ -2
CHD9-218ENST00000566029 C9orf47Q6ZRZ4 202 aa2.54□□□□□ -2
CHD9-218ENST00000566029 SPRED2Q7Z698 418 aa2.54□□□□□ -2
CHD9-218ENST00000566029 CADM4Q8NFZ8 388 aa2.54□□□□□ -2
CHD9-218ENST00000566029 PTPMT1Q8WUK0 201 aaPredicted RBP2.54□□□□□ -2
CHD9-218ENST00000566029 IGHV2-70DA0A0C4DH43 119 aa2.54□□□□□ -2
CHD9-218ENST00000566029 NPIPB15A6NHN6 443 aaPredicted RBP2.54□□□□□ -2
CHD9-218ENST00000566029 PRKNO60260 465 aaPredicted RBP2.54□□□□□ -2
CHD9-218ENST00000566029 GPM6AP51674 278 aa2.54□□□□□ -2
CHD9-218ENST00000566029 LCN6P62502 163 aa2.54□□□□□ -2
CHD9-218ENST00000566029 MRPS6P82932 125 aaKnown RBP2.54□□□□□ -2
CHD9-218ENST00000566029 LDLRAD2Q5SZI1 272 aa2.54□□□□□ -2
CHD9-218ENST00000566029 GTSCR1Q86UQ5 136 aa2.54□□□□□ -2
CHD9-218ENST00000566029 TMEFF1Q8IYR6 380 aa2.54□□□□□ -2
CHD9-218ENST00000566029 RTBDNQ9BSG5 229 aaPredicted RBP2.54□□□□□ -2
CHD9-218ENST00000566029 C11orf68Q9H3H3 251 aaKnown RBP2.54□□□□□ -2
CHD9-218ENST00000566029 RP1P56715 2156 aa2.54□□□□□ -2
CHD9-218ENST00000566029 TBPL1P62380 186 aa2.54□□□□□ -2
CHD9-218ENST00000566029 FZD2Q14332 565 aa2.54□□□□□ -2
CHD9-218ENST00000566029 OTPQ5XKR4 325 aa2.54□□□□□ -2
CHD9-218ENST00000566029 ODF3L1Q8IXM7 274 aa2.54□□□□□ -2
CHD9-218ENST00000566029 FLYWCH2Q96CP2 140 aaKnown RBP2.54□□□□□ -2
CHD9-218ENST00000566029 CNRIP1Q96F85 164 aaPredicted RBP2.54□□□□□ -2
CHD9-218ENST00000566029 HELZP42694 1942 aaKnown RBP2.54□□□□□ -2
CHD9-218ENST00000566029 COL4A6Q14031 1691 aa2.54□□□□□ -2
CHD9-218ENST00000566029 FAHP16930 419 aa2.54□□□□□ -2
CHD9-218ENST00000566029 IL11RAQ14626 422 aa2.54□□□□□ -2
CHD9-218ENST00000566029 SPATA45Q537H7 98 aa2.54□□□□□ -2
CHD9-218ENST00000566029 ACTL10Q5JWF8 245 aa2.54□□□□□ -2
CHD9-218ENST00000566029 C8orf44Q96CB5 159 aa2.54□□□□□ -2
CHD9-218ENST00000566029 TBX15Q96SF7 602 aa2.54□□□□□ -2
CHD9-218ENST00000566029 WSB1Q9Y6I7 421 aa2.54□□□□□ -2
CHD9-218ENST00000566029 IGHV2OR16-5A0A0B4J2B6 119 aa2.54□□□□□ -2
CHD9-218ENST00000566029 AHRRA9YTQ3 701 aa2.54□□□□□ -2
CHD9-218ENST00000566029 SYNGR4O95473 234 aa2.54□□□□□ -2
CHD9-218ENST00000566029 NCR2O95944 276 aa2.54□□□□□ -2
CHD9-218ENST00000566029 RPS4XP62701 263 aaKnown RBP2.54□□□□□ -2
CHD9-218ENST00000566029 SLAQ13239 276 aa2.54□□□□□ -2
CHD9-218ENST00000566029 RNFT1Q5M7Z0 435 aa2.54□□□□□ -2
CHD9-218ENST00000566029 LCN10Q6JVE6 187 aa2.54□□□□□ -2
CHD9-218ENST00000566029 MOGAT3Q86VF5 341 aa2.54□□□□□ -2
CHD9-218ENST00000566029 STPG3Q8N7X2 389 aa2.54□□□□□ -2
CHD9-218ENST00000566029 C12orf76Q8N812 135 aaPredicted RBP2.54□□□□□ -2
CHD9-218ENST00000566029 PSMG3Q9BT73 122 aaPredicted RBP2.54□□□□□ -2
CHD9-218ENST00000566029 CISD1Q9NZ45 108 aaKnown RBP2.54□□□□□ -2
CHD9-218ENST00000566029 SIP14410 1827 aa2.54□□□□□ -2
CHD9-218ENST00000566029 GREB1LQ9C091 1923 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms