RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 RBM7Q9Y580 266 aaKnown RBP16.28■□□□□ 0.2
CLN6-205ENST00000564846 IFNA21P01568 189 aa16.28■□□□□ 0.2
CLN6-205ENST00000564846 HOXB5P09067 269 aa16.28■□□□□ 0.2
CLN6-205ENST00000564846 IFITM2Q01629 132 aa16.28■□□□□ 0.2
CLN6-205ENST00000564846 PPP1R1CQ8WVI7 109 aa16.28■□□□□ 0.2
CLN6-205ENST00000564846 MSI2Q96DH6 328 aaKnown RBP16.28■□□□□ 0.2
CLN6-205ENST00000564846 GON7Q9BXV9 100 aa16.28■□□□□ 0.2
CLN6-205ENST00000564846 RAB9BQ9NP90 201 aa16.28■□□□□ 0.2
CLN6-205ENST00000564846 USP24Q9UPU5 2620 aa16.27■□□□□ 0.2
CLN6-205ENST00000564846 TRAV14DV4A0A0A6YYC5 116 aa16.27■□□□□ 0.2
CLN6-205ENST00000564846 PGLYRP1O75594 196 aaPredicted RBP16.27■□□□□ 0.2
CLN6-205ENST00000564846 B3GALNT1O75752 331 aa16.27■□□□□ 0.2
CLN6-205ENST00000564846 SELLP14151 372 aa16.27■□□□□ 0.2
CLN6-205ENST00000564846 HFEQ30201 348 aa16.27■□□□□ 0.2
CLN6-205ENST00000564846 FAM216BQ8N7L0 139 aa16.27■□□□□ 0.2
CLN6-205ENST00000564846 OR52L2PQ8NGH6 319 aa16.27■□□□□ 0.2
CLN6-205ENST00000564846 C2orf50Q96LR7 162 aa16.27■□□□□ 0.2
CLN6-205ENST00000564846 TP53RKQ96S44 253 aa16.27■□□□□ 0.2
CLN6-205ENST00000564846 DCTN5Q9BTE1 182 aa16.27■□□□□ 0.2
CLN6-205ENST00000564846 SLA2Q9H6Q3 261 aa16.27■□□□□ 0.2
CLN6-205ENST00000564846 OR2S2Q9NQN1 319 aa16.27■□□□□ 0.2
CLN6-205ENST00000564846 CBLN4Q9NTU7 201 aa16.27■□□□□ 0.2
CLN6-205ENST00000564846 IGSF10Q6WRI0 2623 aa16.27■□□□□ 0.19
CLN6-205ENST00000564846 A0A1B0GW55 424 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 B8ZZF3 427 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 TMPRSS2O15393 492 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 OR8U9P0C7N5 309 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 DUX4L2P0CJ85 424 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 DUX4L3P0CJ86 424 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 DUX4L4P0CJ87 422 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 DUX4L5P0CJ88 424 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 DUX4L6P0CJ89 424 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 DUX4L7P0CJ90 424 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 DUX4L9Q6RFH8 374 aaPredicted RBP16.26■□□□□ 0.19
CLN6-205ENST00000564846 OR8U1Q8NH10 309 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 C18orf12Q96KH6 178 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 TMEM222Q9H0R3 208 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 DUX4Q9UBX2 424 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 UBE2J1Q9Y385 318 aaPredicted RBP16.26■□□□□ 0.19
CLN6-205ENST00000564846 FXYD6-FXYD2A0A087WZ82 144 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 WNT2P09544 360 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 SLC25A4P12235 298 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 C4BPBP20851 252 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 C11orf87Q6NUJ2 197 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 RFESDQ8TAC1 157 aa16.26■□□□□ 0.19
CLN6-205ENST00000564846 PARP12Q9H0J9 701 aaKnown RBP16.26■□□□□ 0.19
CLN6-205ENST00000564846 MPTX1A8MV57 137 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 H0Y980 276 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 RGS13O14921 159 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 IGLV2-14P01704 120 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 IGFBP2P18065 325 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 PSMB6P28072 239 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 GGNBP1Q5YKI7 109 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 TMEM65Q6PI78 240 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 ZBTB34Q8NCN2 500 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 FAM216AQ8WUB2 273 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 OR10C1Q96KK4 312 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 TMEM56Q96MV1 263 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 JPT1Q9UK76 154 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 KCNS2Q9ULS6 477 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 TMEM56-RWDD3S4R434 201 aa16.25■□□□□ 0.19
CLN6-205ENST00000564846 SMG1Q96Q15 3661 aaKnown RBP16.24■□□□□ 0.19
CLN6-205ENST00000564846 TRGV10A0A0A0MS01 117 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 PIGBOS1A0A0B4J2F0 54 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 TNFRSF13BO14836 293 aaPredicted RBP16.24■□□□□ 0.19
CLN6-205ENST00000564846 ARPC5O15511 151 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 TNFSF12O43508 249 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 NDUFA2O43678 99 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 CGB3P0DN86 165 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 CGB7P0DN87 165 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 F2RP25116 425 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 GNMTQ14749 295 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 MSMO1Q15800 293 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 LRRC37A5PQ49AS3 106 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 ZNF645Q8N7E2 425 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 RAB1BQ9H0U4 201 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 CALYQ9NYX4 217 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 PAIP2BQ9ULR5 123 aaKnown RBP16.24■□□□□ 0.19
CLN6-205ENST00000564846 CACNA1BQ00975 2339 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 PKDREJQ9NTG1 2253 aa16.24■□□□□ 0.19
CLN6-205ENST00000564846 F2RL2O00254 374 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 MPC2O95563 127 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 FSTL3O95633 263 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 UCP1P25874 307 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 PPP1CCP36873 323 aaKnown RBP16.23■□□□□ 0.19
CLN6-205ENST00000564846 IAH1Q2TAA2 248 aaPredicted RBP16.23■□□□□ 0.19
CLN6-205ENST00000564846 C11orf71Q6IPW1 123 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 THAP6Q8TBB0 222 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 SLC25A10Q9UBX3 287 aaPredicted RBP16.23■□□□□ 0.19
CLN6-205ENST00000564846 TMED3Q9Y3Q3 217 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 ARFGEF3Q5TH69 2177 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 DSCAMO60469 2012 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 MEX3AA1L020 520 aaKnown RBP16.23■□□□□ 0.19
CLN6-205ENST00000564846 C19orf84I3L1E1 186 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 L7N2F9 121 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 CDS2O95674 445 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 RPA2P15927 270 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 CXCL2P19875 107 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 IL15RAQ13261 267 aa16.23■□□□□ 0.19
CLN6-205ENST00000564846 TMEM268Q5VZI3 342 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms