RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ZNF785A8K8V0 405 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 MS4A18H0YCH9 400 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 BET1O15155 118 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 NME2P1O60361 137 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 SLC9A3R2Q15599 337 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 MS4A18Q3C1V0 323 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 FAM181AQ8N9Y4 354 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 OR51T1Q8NGJ9 327 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 FAM57AQ8TBR7 257 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 MARVELD3Q96A59 401 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 SLC25A44Q96H78 314 aaPredicted RBP2.92□□□□□ -1.94
CHD9-213ENST00000564845 SHPKQ9UHJ6 478 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 A0A1W2PPQ1 181 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ANKUB1A6NFN9 424 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 AHRRA9YTQ3 701 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 PLPP2O43688 288 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 AMBPP02760 352 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ISG15P05161 165 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 SELENOPP49908 381 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 LCN2P80188 198 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 KIAA0141Q14154 515 aaPredicted RBP2.92□□□□□ -1.94
CHD9-213ENST00000564845 LINC01545Q5VT33 79 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ZNF626Q68DY1 528 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ZNF546Q86UE3 836 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 LPAR5Q9H1C0 372 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 MSL2Q9HCI7 577 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 SEC16AO15027 2179 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 TMEM269A0A1B0GVZ9 245 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 AGFG2O95081 481 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ZFPL1O95159 310 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 CST2P09228 141 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ACKR3P25106 362 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 FCN2Q15485 313 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 C2orf68Q2NKX9 166 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 H1FOOQ8IZA3 346 aaPredicted RBP2.92□□□□□ -1.94
CHD9-213ENST00000564845 APCDD1LQ8NCL9 501 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ZNF501Q96CX3 271 aaPredicted RBP2.92□□□□□ -1.94
CHD9-213ENST00000564845 WBP1Q96G27 269 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 MRPL13Q9BYD1 178 aaKnown RBP2.92□□□□□ -1.94
CHD9-213ENST00000564845 NMNAT2Q9BZQ4 307 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 WWTR1Q9GZV5 400 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 PURGQ9UJV8 347 aaKnown RBP2.92□□□□□ -1.94
CHD9-213ENST00000564845 FREM3P0C091 2139 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 C13orf42A0A1B0GVH6 325 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 TMEM30CPA0ZSE6 113 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ZNF503-AS2A6NEH8 195 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 MPTX1A8MV57 137 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 FNDC10F2Z333 226 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 M0R135 149 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 TRGC1P0CF51 173 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 SUCLG1P53597 346 aaKnown RBP2.92□□□□□ -1.94
CHD9-213ENST00000564845 BIDP55957 195 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 CLDN17P56750 224 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 JOSD1Q15040 202 aaPredicted RBP2.92□□□□□ -1.94
CHD9-213ENST00000564845 PMCHL1Q16048 86 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ZNF687Q8N1G0 1237 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 OR52I2Q8NH67 350 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 CA5BP1Q8WTZ4 195 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ZNF799Q96GE5 643 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ZNF488Q96MN9 340 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 RNF5Q99942 180 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ARV1Q9H2C2 271 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 LIPGQ9Y5X9 500 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 FER1L5A0AVI2 2057 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 TANC2Q9HCD6 1990 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 CHD8Q9HCK8 2581 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 TIMM8AO60220 97 aaPredicted RBP2.92□□□□□ -1.94
CHD9-213ENST00000564845 HPXP02790 462 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ACKR1Q16570 336 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 C12orf54Q6X4T0 127 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ZNF66Q6ZN08 573 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 OR4A5Q8NH83 315 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 SYNPRQ8TBG9 265 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 RND1Q92730 232 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 PACRGQ96M98 296 aaPredicted RBP2.92□□□□□ -1.94
CHD9-213ENST00000564845 ARL6Q9H0F7 186 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 LILRA1O75019 489 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 GIFP27352 417 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 CCKARP32238 428 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ZNF154Q13106 437 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 FAM71F2Q6NXP2 309 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 ZDHHC23Q8IYP9 409 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 AQP3Q92482 292 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 GFI1Q99684 422 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 GSX2Q9BZM3 304 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 DEPPQ9NTK1 212 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 OR1A1Q9P1Q5 309 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 NUP210LQ5VU65 1888 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 SLC17A2O00624 439 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 TRAF3IP2O43734 574 aaPredicted RBP2.92□□□□□ -1.94
CHD9-213ENST00000564845 C1QBP02746 253 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 SMIM10L1P0DMW3 83 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 NXPH1P58417 271 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 RNF4P78317 190 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 AESQ08117 197 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 VHLLQ6RSH7 139 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 SYT8Q8NBV8 401 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 OR10X1Q8NGY0 326 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 RNF185Q96GF1 192 aa2.92□□□□□ -1.94
CHD9-213ENST00000564845 SMIM10Q96HG1 83 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms