RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 C1QTNF6Q9BXI9 259 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 PLA2G12AQ9BZM1 189 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 RACGAP1Q9H0H5 632 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 SYT4Q9H2B2 425 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 C1orf198Q9H425 327 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 ZNF442Q9H7R0 627 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 SIAEQ9HAT2 523 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 NTN4Q9HB63 628 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 AMBNQ9NP70 447 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 TNFRSF19Q9NS68 423 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 CA10Q9NS85 328 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 CBLN4Q9NTU7 201 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 PITPNC1Q9UKF7 332 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 TBC1D24Q9ULP9 559 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 COPS3Q9UNS2 423 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 MOKQ9UQ07 419 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 BAIAP2Q9UQB8 552 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 SAMHD1Q9Y3Z3 626 aaKnown RBP3.62□□□□□ -1.83
LINC00254-201ENST00000563416 IER3IP1Q9Y5U9 82 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 CDH10Q9Y6N8 788 aa3.62□□□□□ -1.83
LINC00254-201ENST00000563416 C2CD3Q4AC94 2353 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 ZFHX3Q15911 3703 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 MXRA5Q9NR99 2828 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 IGHV3OR16-12A0A075B7B8 117 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 IGLV1-36A0A0B4J1U3 117 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 FOXI3A8MTJ6 420 aaPredicted RBP3.61□□□□□ -1.83
LINC00254-201ENST00000563416 NDUFS8O00217 210 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 DCTN6O00399 190 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 XKRYO14609 159 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 AKR7A2O43488 359 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 ATP5LO75964 103 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 KBTBD11O94819 623 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 RAB36O95755 333 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 TMEM50AO95807 157 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 PTHP01270 115 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 GAPDHP04406 335 aaKnown RBP3.61□□□□□ -1.83
LINC00254-201ENST00000563416 COX5BP10606 129 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 CD79AP11912 226 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 HIST1H1CP16403 213 aaKnown RBP3.61□□□□□ -1.83
LINC00254-201ENST00000563416 SERPINA2P20848 420 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 MSR1P21757 451 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 CD1BP29016 333 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 CRABP1P29762 137 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 BMI1P35226 326 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 GLRXP35754 106 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 LSM6P62312 80 aaKnown RBP3.61□□□□□ -1.83
LINC00254-201ENST00000563416 HIST1H3AP68431 136 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 SCRN3Q0VDG4 424 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 AQP6Q13520 282 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 ALKBH6Q3KRA9 238 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 PABPC1L2AQ5JQF8 200 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 HIST2H3PS2Q5TEC6 136 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 PLCXD3Q63HM9 321 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 TMEM53Q6P2H8 277 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 DNM1P34Q6PK57 102 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 HIST2H3AQ71DI3 136 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 MTURNQ8N3F0 131 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 LRRC18Q8N456 261 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 CD177Q8N6Q3 437 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 SLC30A7Q8NEW0 376 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 WFDC11Q8NEX6 87 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 SDR9C7Q8NEX9 313 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 SLC26A10Q8NG04 563 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 OR10G2Q8NGC3 310 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 OR52L1Q8NGH7 329 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 OR13F1Q8NGS4 319 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 DNAJC9Q8WXX5 260 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 NRBF2Q96F24 287 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 ERMAPQ96PL5 475 aaPredicted RBP3.61□□□□□ -1.83
LINC00254-201ENST00000563416 NMNAT3Q96T66 252 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 NIPSNAP1Q9BPW8 284 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 KCNS3Q9BQ31 491 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 OR2H1Q9GZK4 316 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 NIPAL2Q9H841 368 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 ARMC1Q9NVT9 282 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 PDP1Q9P0J1 537 aaPredicted RBP3.61□□□□□ -1.83
LINC00254-201ENST00000563416 ATPIF1Q9UII2 106 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 COMMD3-BMI1R4GMX3 469 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 CSPG4Q6UVK1 2322 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 ARHGAP32A7KAX9 2087 aa3.61□□□□□ -1.83
LINC00254-201ENST00000563416 SONP18583 2426 aaKnown RBP3.6□□□□□ -1.83
LINC00254-201ENST00000563416 IGLV3-9A0A075B6K5 115 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 OR6C6A6NF89 314 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 C12orf71A8MTZ7 269 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 TRDCB7Z8K6 153 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 H3BSA7 217 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 PRKYO43930 277 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 SLC16A7O60669 478 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 E2F6O75461 281 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 SOX14O95416 240 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 ERCC1P07992 297 aaPredicted RBP3.6□□□□□ -1.83
LINC00254-201ENST00000563416 CD55P08174 381 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 OR4A8P0C604 315 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 ZNF250P15622 560 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 KITLGP21583 273 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 STOMP27105 288 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 FGF9P31371 208 aaPredicted RBP3.6□□□□□ -1.83
LINC00254-201ENST00000563416 EVX1P49640 407 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 PPOXP50336 477 aa3.6□□□□□ -1.83
LINC00254-201ENST00000563416 FABP6P51161 128 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms