RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 ASPHD1Q5U4P2 390 aa12.88□□□□□ -0.35
CMTM3-205ENST00000562707 TRAT1Q6PIZ9 186 aa12.88□□□□□ -0.35
CMTM3-205ENST00000562707 OVCH2Q7RTZ1 564 aa12.88□□□□□ -0.35
CMTM3-205ENST00000562707 PYDC1Q8WXC3 89 aa12.88□□□□□ -0.35
CMTM3-205ENST00000562707 ZNF251Q9BRH9 671 aa12.88□□□□□ -0.35
CMTM3-205ENST00000562707 GHITMQ9H3K2 345 aa12.88□□□□□ -0.35
CMTM3-205ENST00000562707 MRPS18AQ9NVS2 196 aaKnown RBP12.88□□□□□ -0.35
CMTM3-205ENST00000562707 ERGIC3Q9Y282 383 aa12.88□□□□□ -0.35
CMTM3-205ENST00000562707 A0A1W2PP11 408 aa12.87□□□□□ -0.35
CMTM3-205ENST00000562707 ATP6V0E1O15342 81 aa12.87□□□□□ -0.35
CMTM3-205ENST00000562707 IGLV1-40P01703 118 aa12.87□□□□□ -0.35
CMTM3-205ENST00000562707 HLA-DRB1P01911 266 aa12.87□□□□□ -0.35
CMTM3-205ENST00000562707 ACTBP60709 375 aa12.87□□□□□ -0.35
CMTM3-205ENST00000562707 GABPB1Q06547 395 aaPredicted RBP12.87□□□□□ -0.35
CMTM3-205ENST00000562707 RIPK1Q13546 671 aa12.87□□□□□ -0.35
CMTM3-205ENST00000562707 CBR4Q8N4T8 237 aa12.87□□□□□ -0.35
CMTM3-205ENST00000562707 OR1L1Q8NH94 360 aa12.87□□□□□ -0.35
CMTM3-205ENST00000562707 MRPS24Q96EL2 167 aaKnown RBP12.87□□□□□ -0.35
CMTM3-205ENST00000562707 ZNF184Q99676 751 aaPredicted RBP12.87□□□□□ -0.35
CMTM3-205ENST00000562707 OR2S2Q9NQN1 319 aa12.87□□□□□ -0.35
CMTM3-205ENST00000562707 FAM90A10PA6NDY2 464 aa12.86□□□□□ -0.35
CMTM3-205ENST00000562707 LIMS3P0CW19 117 aa12.86□□□□□ -0.35
CMTM3-205ENST00000562707 LIMS4P0CW20 117 aa12.86□□□□□ -0.35
CMTM3-205ENST00000562707 SPNP16150 400 aa12.86□□□□□ -0.35
CMTM3-205ENST00000562707 RAB12Q6IQ22 244 aa12.86□□□□□ -0.35
CMTM3-205ENST00000562707 LIN54Q6MZP7 749 aa12.86□□□□□ -0.35
CMTM3-205ENST00000562707 TMPRSS11AQ6ZMR5 421 aa12.86□□□□□ -0.35
CMTM3-205ENST00000562707 TAF9BQ9HBM6 251 aa12.86□□□□□ -0.35
CMTM3-205ENST00000562707 KCNIP1Q9NZI2 227 aa12.86□□□□□ -0.35
CMTM3-205ENST00000562707 RCC2Q9P258 522 aaKnown RBP12.86□□□□□ -0.35
CMTM3-205ENST00000562707 CKLFQ9UBR5 152 aa12.86□□□□□ -0.35
CMTM3-205ENST00000562707 PEX16Q9Y5Y5 336 aa12.86□□□□□ -0.35
CMTM3-205ENST00000562707 HUWE1Q7Z6Z7 4374 aaKnown RBP12.86□□□□□ -0.35
CMTM3-205ENST00000562707 IGHV7-81A0A0B4J1V7 117 aa12.85□□□□□ -0.35
CMTM3-205ENST00000562707 LINC01619G3V211 115 aa12.85□□□□□ -0.35
CMTM3-205ENST00000562707 NBR2O15453 112 aa12.85□□□□□ -0.35
CMTM3-205ENST00000562707 CA11O75493 328 aa12.85□□□□□ -0.35
CMTM3-205ENST00000562707 FRMD6-AS1P0C7T7 363 aa12.85□□□□□ -0.35
CMTM3-205ENST00000562707 GP9P14770 177 aa12.85□□□□□ -0.35
CMTM3-205ENST00000562707 RCC1P18754 421 aaPredicted RBP12.85□□□□□ -0.35
CMTM3-205ENST00000562707 DOC2BQ14184 412 aa12.85□□□□□ -0.35
CMTM3-205ENST00000562707 MORN2Q502X0 79 aa12.85□□□□□ -0.35
CMTM3-205ENST00000562707 XAF1Q6GPH4 301 aa12.85□□□□□ -0.35
CMTM3-205ENST00000562707 OR6Q1Q8NGQ2 317 aa12.85□□□□□ -0.35
CMTM3-205ENST00000562707 DLX4Q92988 240 aaPredicted RBP12.85□□□□□ -0.35
CMTM3-205ENST00000562707 ORAI1Q96D31 301 aa12.85□□□□□ -0.35
CMTM3-205ENST00000562707 ANKRD60Q9BZ19 345 aa12.85□□□□□ -0.35
CMTM3-205ENST00000562707 FGF20Q9NP95 211 aaPredicted RBP12.85□□□□□ -0.35
CMTM3-205ENST00000562707 KIAA1456Q9P272 454 aa12.85□□□□□ -0.35
CMTM3-205ENST00000562707 MRPS28Q9Y2Q9 187 aaKnown RBP12.85□□□□□ -0.35
CMTM3-205ENST00000562707 STAB2Q8WWQ8 2551 aa12.84□□□□□ -0.35
CMTM3-205ENST00000562707 LOC100130705A0A1B0GUX0 176 aa12.84□□□□□ -0.35
CMTM3-205ENST00000562707 CNTFRP26992 372 aa12.84□□□□□ -0.35
CMTM3-205ENST00000562707 BLVRBP30043 206 aaPredicted RBP12.84□□□□□ -0.35
CMTM3-205ENST00000562707 ADARB1P78563 741 aaKnown RBP12.84□□□□□ -0.35
CMTM3-205ENST00000562707 C5orf64Q2M2E5 130 aa12.84□□□□□ -0.35
CMTM3-205ENST00000562707 GLIPR1L1Q6UWM5 242 aa12.84□□□□□ -0.35
CMTM3-205ENST00000562707 GAPTQ8N292 157 aa12.84□□□□□ -0.35
CMTM3-205ENST00000562707 MINDY2Q8NBR6 621 aa12.84□□□□□ -0.35
CMTM3-205ENST00000562707 MUL1Q969V5 352 aa12.84□□□□□ -0.35
CMTM3-205ENST00000562707 RITA1Q96K30 269 aa12.84□□□□□ -0.35
CMTM3-205ENST00000562707 NABP2Q9BQ15 211 aa12.84□□□□□ -0.35
CMTM3-205ENST00000562707 ABHD14AQ9BUJ0 271 aa12.84□□□□□ -0.35
CMTM3-205ENST00000562707 CST11Q9H112 138 aa12.84□□□□□ -0.35
CMTM3-205ENST00000562707 DYNC2H1Q8NCM8 4307 aaKnown RBP12.84□□□□□ -0.35
CMTM3-205ENST00000562707 OGG1O15527 345 aa12.83□□□□□ -0.36
CMTM3-205ENST00000562707 GPX5O75715 221 aa12.83□□□□□ -0.36
CMTM3-205ENST00000562707 GLAP06280 429 aa12.83□□□□□ -0.36
CMTM3-205ENST00000562707 IGFBP3P17936 291 aaPredicted RBP12.83□□□□□ -0.36
CMTM3-205ENST00000562707 SLURP1P55000 103 aa12.83□□□□□ -0.36
CMTM3-205ENST00000562707 OR2G6Q5TZ20 316 aa12.83□□□□□ -0.36
CMTM3-205ENST00000562707 ZFP1Q6P2D0 407 aa12.83□□□□□ -0.36
CMTM3-205ENST00000562707 ZNF554Q86TJ5 538 aa12.83□□□□□ -0.36
CMTM3-205ENST00000562707 JAGN1Q8N5M9 183 aa12.83□□□□□ -0.36
CMTM3-205ENST00000562707 NPBQ8NG41 125 aa12.83□□□□□ -0.36
CMTM3-205ENST00000562707 OR52L2PQ8NGH6 319 aa12.83□□□□□ -0.36
CMTM3-205ENST00000562707 SMIM19Q96E16 107 aa12.83□□□□□ -0.36
CMTM3-205ENST00000562707 MRPL20Q9BYC9 149 aaKnown RBP12.83□□□□□ -0.36
CMTM3-205ENST00000562707 SELENOIQ9C0D9 397 aa12.83□□□□□ -0.36
CMTM3-205ENST00000562707 ALX4Q9H161 411 aaPredicted RBP12.83□□□□□ -0.36
CMTM3-205ENST00000562707 BABAM2Q9NXR7 383 aa12.83□□□□□ -0.36
CMTM3-205ENST00000562707 JPT1Q9UK76 154 aa12.83□□□□□ -0.36
CMTM3-205ENST00000562707 LCE6AA0A183 80 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 A0A1W2PN81 502 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 UBE2QL1A1L167 161 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 FAM90A7PA6NKC0 464 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 FAM90A23PA8MXZ1 464 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 H3BNX3 289 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 RGS11O94810 467 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 OR8U9P0C7N5 309 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 FUT3P21217 361 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 DCKP27707 260 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 CHRNA7P36544 502 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 ETV1P50549 477 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 GNMTQ14749 295 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 ECSCRQ19T08 205 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 ZNF660Q6AZW8 331 aaPredicted RBP12.82□□□□□ -0.36
CMTM3-205ENST00000562707 AWAT2Q6E213 333 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 ACSM6Q6P461 480 aa12.82□□□□□ -0.36
CMTM3-205ENST00000562707 OR13C5Q8NGS8 318 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms