RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 DGUOKQ16854 277 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 KIAA1644Q3SXP7 199 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 C1orf100Q5SVJ3 147 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 WDR25Q64LD2 544 aaPredicted RBP3.68□□□□□ -1.82
SMG1-206ENST00000562668 ELP2Q6IA86 826 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 FAAP20Q6NZ36 180 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 SLC25A26Q70HW3 274 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 CEACAM19Q7Z692 300 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 BIVMQ86UB2 503 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 ZNF573Q86YE8 665 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 CDH26Q8IXH8 852 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 SAXO1Q8IYX7 474 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 BATF2Q8N1L9 274 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 FAM216BQ8N7L0 139 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 ZSCAN4Q8NAM6 433 aaPredicted RBP3.68□□□□□ -1.82
SMG1-206ENST00000562668 DEFB108BQ8NET1 73 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 PXT1Q8NFP0 134 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 TSPAN14Q8NG11 270 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 OR4D6Q8NGJ1 314 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 OR51T1Q8NGJ9 327 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 OR5D18Q8NGL1 313 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 OR5D14Q8NGL3 314 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 OR11L1Q8NGX0 322 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 TSEN15Q8WW01 171 aaKnown RBP3.68□□□□□ -1.82
SMG1-206ENST00000562668 PHYHIPQ92561 330 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 FCGR1BQ92637 280 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 TMEM203Q969S6 136 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 SLAMF9Q96A28 289 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 RFT1Q96AA3 541 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 YIPF6Q96EC8 236 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 BORCS8Q96FH0 119 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 SDSLQ96GA7 329 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 TIMD4Q96H15 378 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 CEP19Q96LK0 163 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 CCL13Q99616 98 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 TMED9Q9BVK6 235 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 SHARPINQ9H0F6 387 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 DNTTIP1Q9H147 329 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 NARFLQ9H6Q4 476 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 MMP26Q9NRE1 261 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 RBFOX1Q9NWB1 397 aaKnown RBP3.68□□□□□ -1.82
SMG1-206ENST00000562668 RASL12Q9NYN1 266 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 IL36GQ9NZH8 169 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 ZNF581Q9P0T4 197 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 OPN4Q9UHM6 478 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 SLC7A11Q9UPY5 501 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.68□□□□□ -1.828e-10■■■■■ 50.3
SMG1-206ENST00000562668 CREBBPQ92793 2442 aa3.68□□□□□ -1.82
SMG1-206ENST00000562668 A0A087WXM4 84 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 TRAV38-1A0A0B4J264 116 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 PPIAL4CA0A0B4J2A2 164 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 hCG_1807616A0A1W2PRN6 198 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 OR2AT4A6NND4 320 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 FOXI3A8MTJ6 420 aaPredicted RBP3.67□□□□□ -1.82
SMG1-206ENST00000562668 SIGLEC5O15389 551 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 PHF1O43189 567 aaPredicted RBP3.67□□□□□ -1.82
SMG1-206ENST00000562668 NDUFA2O43678 99 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 PAGE4O60829 102 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 MAS1P04201 325 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 CD2P06729 351 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 MSMBP08118 114 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 IRF2P14316 349 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 SRMP19623 302 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 GLRA1P23415 457 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 GADD45AP24522 165 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 PSMA1P25786 263 aaKnown RBP3.67□□□□□ -1.82
SMG1-206ENST00000562668 ZNF93P35789 620 aaPredicted RBP3.67□□□□□ -1.82
SMG1-206ENST00000562668 CEBPDP49716 269 aaPredicted RBP3.67□□□□□ -1.82
SMG1-206ENST00000562668 ZNF146Q15072 292 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 TRAM1Q15629 374 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 NEDD8Q15843 81 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 PNLIPRP3Q17RR3 467 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 HSD17B12Q53GQ0 312 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 NHLRC3Q5JS37 347 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 DDI2Q5TDH0 399 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 CYB5R2Q6BCY4 276 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 Q6P435 159 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 C17orf107Q6ZR85 190 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 TCF23Q7RTU1 214 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 SPAG16Q8N0X2 631 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 GBGT1Q8N5D6 347 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 SPICQ8N5J4 248 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 C11orf42Q8N5U0 333 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 LY6G5BQ8NDX9 201 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 OR5T2Q8NGG2 359 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 OR13F1Q8NGS4 319 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 OR51F2Q8NH61 342 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 ZNF671Q8TAW3 534 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 TMIGD2Q96BF3 282 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 GAL3ST1Q99999 423 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 OR51E2Q9H255 320 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 RNF167Q9H6Y7 350 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 RHOFQ9HBH0 211 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 HMG20AQ9NP66 347 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 TMEM138Q9NPI0 162 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 TXNL4BQ9NX01 149 aaKnown RBP3.67□□□□□ -1.82
SMG1-206ENST00000562668 MIOXQ9UGB7 285 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 POLDIP2Q9Y2S7 368 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 DNHD1Q96M86 4753 aa3.67□□□□□ -1.82
SMG1-206ENST00000562668 TEP1Q99973 2627 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms